DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NPPAEVDPD
Uniprot ID:
Q9BY77
Source protein:
Polymerase delta-interacting protein 3
Source gene:
POLDIP3
Class:
DEG_SIAH_1
Location:
388:396
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9988
ASA_SCORE:
82.4778
COIL:
0.7636
CONS_SCORE:
0.3801
DSS_SCORE:
0.5482
HELIX:
0.2074
FCONS_SCORE:
1.216
RIG_SCORE:
0.6472
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R379C
TCGA-4Z-AA80
BLCA
TCGA
NPPAEVDPD
DEG_SIAH_1
0.0833
p.R379C
DO218986
BLCA
ICGC
NPPAEVDPD
DEG_SIAH_1
0.0833
p.R380K
TCGA-EE-A2A2
SKCM
TCGA
NPPAEVDPD
DEG_SIAH_1
0.1111
p.R380K
DO37583
SKCM
ICGC
NPPAEVDPD
DEG_SIAH_1
0.1111
p.T397I
TCGA-FW-A3R5
SKCM
TCGA
NPPAEVDPD
DEG_SIAH_1
0.3056
p.T397I
DO37406
SKCM
ICGC
NPPAEVDPD
DEG_SIAH_1
0.3056
p.P390S
DO222880
MELA
ICGC
NPPAEVDPD
DEG_SIAH_1
0.5641
p.S405C
DO229257
THCA
ICGC
NPPAEVDPD
DEG_SIAH_1
0.5278
p.A401S
SIDM00749
Non-Small Cell Lung Carcinoma
GDSC
NPPAEVDPD
DEG_SIAH_1
0.1944
p.A401S
NCI-H1573
lung
COSMIC
NPPAEVDPD
DEG_SIAH_1
0.1944
p.S385C
SIDM00628
Breast Carcinoma
GDSC
NPPAEVDPD
DEG_SIAH_1
0.6944
p.S405F
ACH-000106
Lymphoma
CCLE
NPPAEVDPD
DEG_SIAH_1
0.5278
p.S405F
JVM-2
haematopoietic_and_lymphoid_tissue
COSMIC
NPPAEVDPD
DEG_SIAH_1
0.5278
p.A384S
ACH-000916
Lung Cancer
CCLE
NPPAEVDPD
DEG_SIAH_1
0.2222
p.A384S
NCI-H1573
lung
COSMIC
NPPAEVDPD
DEG_SIAH_1
0.2222
p.P385L
SK-MEL-5
skin
COSMIC
NPPAEVDPD
DEG_SIAH_1
0.6944
p.T383M
SNU-1040
large_intestine
COSMIC
NPPAEVDPD
DEG_SIAH_1
0.6389
Drug responses associated with POLDIP3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NPPAEVDPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BY77
Polymerase delta-interacting protein 3
DEG_SIAH_1
388:396
NPPAEVDPD
SIAH1,SIAH2,SIAH3
0.9988
More...