DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NPPAWVRPD
Uniprot ID:
Q8N4C8
Source protein:
Misshapen-like kinase 1
Source gene:
MINK1
Class:
DEG_SIAH_1
Location:
653:661
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9517
ASA_SCORE:
98.3
COIL:
0.9414
CONS_SCORE:
0.2436
DSS_SCORE:
0.7668
HELIX:
0.0259
FCONS_SCORE:
0.9603
RIG_SCORE:
0.6124
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S651N
TCGA-AJ-A3OL
UCEC
TCGA
NPPAWVRPD
DEG_SIAH_1
0.2778
p.S651N
DO43001
UCEC
ICGC
NPPAWVRPD
DEG_SIAH_1
0.2778
p.P666S
TCGA-DF-A2KU
UCEC
TCGA
NPPAWVRPD
DEG_SIAH_1
0.1944
p.P666S
DO223286
UCEC
ICGC
NPPAWVRPD
DEG_SIAH_1
0.1944
p.P660S
TCGA-VS-A8EC
CESC
TCGA
NPPAWVRPD
DEG_SIAH_1
0.6752
p.P660S
DO51618
CESC
ICGC
NPPAWVRPD
DEG_SIAH_1
0.6752
p.R659H
DO229016
COCA
ICGC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM01038
B-Cell Non-Hodgkin's Lymphoma
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM00370
T-Lymphoblastic Leukemia
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM00251
Gastric Carcinoma
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM00299
Other Sarcomas
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM00498
Colorectal Carcinoma
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM01146
Gastric Carcinoma
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM00289
B-Lymphoblastic Leukemia
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM01033
Bladder Carcinoma
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM01471
Chronic Myelogenous Leukemia
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM00164
Biliary Tract Carcinoma
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.P654H
DO234219
ESAD
ICGC
NPPAWVRPD
DEG_SIAH_1
0.7694
p.G647A
DO228330
LICA
ICGC
NPPAWVRPD
DEG_SIAH_1
0.1667
p.P654S
SIDM00007
Other Solid Cancers
GDSC
NPPAWVRPD
DEG_SIAH_1
0.6752
p.P654S
ACH-001550
Skin Cancer
CCLE
NPPAWVRPD
DEG_SIAH_1
0.6752
p.P654S
MCC13
skin
COSMIC
NPPAWVRPD
DEG_SIAH_1
0.6752
p.P654L
SIDM00007
Other Solid Cancers
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7582
p.P654L
ACH-001550
Skin Cancer
CCLE
NPPAWVRPD
DEG_SIAH_1
0.7582
p.P654L
MCC13
skin
COSMIC
NPPAWVRPD
DEG_SIAH_1
0.7582
p.S651G
SIDM00283
B-Cell Non-Hodgkin's Lymphoma
GDSC
NPPAWVRPD
DEG_SIAH_1
0.2778
p.T652A
SW756
cervix
COSMIC
NPPAWVRPD
DEG_SIAH_1
0.3056
Drug responses associated with MINK1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NPPAWVRPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N4C8
Misshapen-like kinase 1
DEG_SIAH_1
653:661
NPPAWVRPD
SIAH1,SIAH2,SIAH3
0.9517
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