DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NPPAWVRPD
Uniprot ID:
Q8N4C8
Source protein:
Misshapen-like kinase 1
Source gene:
MINK1
Class:
DEG_SIAH_1
Location:
653:661
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9517
ASA_SCORE:
98.3
COIL:
0.9414
CONS_SCORE:
0.2436
DSS_SCORE:
0.7668
HELIX:
0.0259
FCONS_SCORE:
0.9603
RIG_SCORE:
0.6124
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P654H
DO234219
ESAD
ICGC
NPPAWVRPD
DEG_SIAH_1
0.7694
p.P654L
SIDM00007
Other Solid Cancers
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7582
p.P654L
ACH-001550
Skin Cancer
CCLE
NPPAWVRPD
DEG_SIAH_1
0.7582
p.P654L
MCC13
skin
COSMIC
NPPAWVRPD
DEG_SIAH_1
0.7582
p.R659H
DO229016
COCA
ICGC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM01038
B-Cell Non-Hodgkin's Lymphoma
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM00370
T-Lymphoblastic Leukemia
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM00251
Gastric Carcinoma
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM00299
Other Sarcomas
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM00498
Colorectal Carcinoma
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM01146
Gastric Carcinoma
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM00289
B-Lymphoblastic Leukemia
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM01033
Bladder Carcinoma
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM01471
Chronic Myelogenous Leukemia
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.R659H
SIDM00164
Biliary Tract Carcinoma
GDSC
NPPAWVRPD
DEG_SIAH_1
0.7133
p.P660S
TCGA-VS-A8EC
CESC
TCGA
NPPAWVRPD
DEG_SIAH_1
0.6752
p.P660S
DO51618
CESC
ICGC
NPPAWVRPD
DEG_SIAH_1
0.6752
p.P654S
SIDM00007
Other Solid Cancers
GDSC
NPPAWVRPD
DEG_SIAH_1
0.6752
p.P654S
ACH-001550
Skin Cancer
CCLE
NPPAWVRPD
DEG_SIAH_1
0.6752
p.P654S
MCC13
skin
COSMIC
NPPAWVRPD
DEG_SIAH_1
0.6752
p.T652A
SW756
cervix
COSMIC
NPPAWVRPD
DEG_SIAH_1
0.3056
p.S651N
TCGA-AJ-A3OL
UCEC
TCGA
NPPAWVRPD
DEG_SIAH_1
0.2778
p.S651N
DO43001
UCEC
ICGC
NPPAWVRPD
DEG_SIAH_1
0.2778
p.S651G
SIDM00283
B-Cell Non-Hodgkin's Lymphoma
GDSC
NPPAWVRPD
DEG_SIAH_1
0.2778
p.P666S
TCGA-DF-A2KU
UCEC
TCGA
NPPAWVRPD
DEG_SIAH_1
0.1944
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Drug responses associated with MINK1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of NPPAWVRPD
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N4C8
Misshapen-like kinase 1
DEG_SIAH_1
653:661
NPPAWVRPD
SIAH1,SIAH2,SIAH3
0.9517
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