DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NRGLLFEVG
Uniprot ID:
P08F94
Source protein:
Fibrocystin
Source gene:
PKHD1
Class:
DEG_APCC_DBOX_1
Location:
327:335
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6427
ASA_SCORE:
34.0222
COIL:
0.4463
CONS_SCORE:
0.5064
DSS_SCORE:
0.4233
HELIX:
0.0341
FCONS_SCORE:
1.5389
RIG_SCORE:
0.7832
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G340V
TCGA-34-8454
LUSC
TCGA
NRGLLFEVG
DEG_APCC_DBOX_1
0.1944
p.G340V
DO50094
LUSC
ICGC
NRGLLFEVG
DEG_APCC_DBOX_1
0.1944
p.V338I
TCGA-AA-3947
COAD
TCGA
NRGLLFEVG
DEG_APCC_DBOX_1
0.25
p.V338I
DO8192
COAD
ICGC
NRGLLFEVG
DEG_APCC_DBOX_1
0.25
p.D317Y
TCGA-AG-A002
READ
TCGA
NRGLLFEVG
DEG_APCC_DBOX_1
0.0556
p.R328L
TCGA-AX-A2HC
UCEC
TCGA
NRGLLFEVG
DEG_APCC_DBOX_1
0.8428
p.R328L
DO41572
UCEC
ICGC
NRGLLFEVG
DEG_APCC_DBOX_1
0.8428
p.R328Q
TCGA-FI-A2D5
UCEC
TCGA
NRGLLFEVG
DEG_APCC_DBOX_1
0.7329
p.R328Q
DO222884
COCA
ICGC
NRGLLFEVG
DEG_APCC_DBOX_1
0.7329
p.R328Q
DO50680
ORCA
ICGC
NRGLLFEVG
DEG_APCC_DBOX_1
0.7329
p.R328Q
DO41331
UCEC
ICGC
NRGLLFEVG
DEG_APCC_DBOX_1
0.7329
p.L341M
DO228952
LICA
ICGC
NRGLLFEVG
DEG_APCC_DBOX_1
0.1667
p.L343M
DO229032
LICA
ICGC
NRGLLFEVG
DEG_APCC_DBOX_1
0.1111
p.T321N
DO229006
LICA
ICGC
NRGLLFEVG
DEG_APCC_DBOX_1
0.1667
p.E339D
DO46493
OV
ICGC
NRGLLFEVG
DEG_APCC_DBOX_1
0.2222
p.D336N
SIDM00190
Melanoma
GDSC
NRGLLFEVG
DEG_APCC_DBOX_1
0.3056
p.D336N
CP66-MEL
skin
COSMIC
NRGLLFEVG
DEG_APCC_DBOX_1
0.3056
Drug responses associated with PKHD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NRGLLFEVG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P08F94
Fibrocystin
DEG_APCC_DBOX_1
327:335
NRGLLFEVG
APC,CDC20,FZR1
0.6427
More...