DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NRKALSCVH
Uniprot ID:
Q8TCU4
Source protein:
Alstrom syndrome protein 1
Source gene:
ALMS1
Class:
DEG_APCC_DBOX_1
Location:
3040:3048
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9669
ASA_SCORE:
82.8667
COIL:
0.5523
CONS_SCORE:
0.5912
DSS_SCORE:
0.2711
HELIX:
0.1544
FCONS_SCORE:
1.4371
RIG_SCORE:
0.7475
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P3052S
TCGA-UY-A9PD
BLCA
TCGA
NRKALSCVH
DEG_APCC_DBOX_1
0.2222
p.S3049W
DO219049
BLCA
ICGC
NRKALSCVH
DEG_APCC_DBOX_1
0.3056
p.A3030V
DO42280
UCEC
ICGC
NRKALSCVH
DEG_APCC_DBOX_1
0.0556
p.P3037R
SIDM00505
Pancreatic Carcinoma
GDSC
NRKALSCVH
DEG_APCC_DBOX_1
0.25
p.P3037R
MIA-PaCa-2
pancreas
COSMIC
NRKALSCVH
DEG_APCC_DBOX_1
0.25
p.P3036R
ACH-000601
Pancreatic Cancer
CCLE
NRKALSCVH
DEG_APCC_DBOX_1
0.6667
p.H3047R
ACH-000786
Lymphoma
CCLE
NRKALSCVH
DEG_APCC_DBOX_1
0.8244
Drug responses associated with ALMS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NRKALSCVH
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TCU4
Alstrom syndrome protein 1
DEG_APCC_DBOX_1
3040:3048
NRKALSCVH
APC,CDC20,FZR1
0.9669
More...