DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
NRPSLFGMP
Uniprot ID:
P35125
Source protein:
Ubiquitin carboxyl-terminal hydrolase 6
Source gene:
USP6
Class:
DEG_APCC_DBOX_1
Location:
894:902
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.778
ASA_SCORE:
61.4667
COIL:
0.7503
CONS_SCORE:
0.3976
DSS_SCORE:
0.1481
HELIX:
0.1349
FCONS_SCORE:
1.2895
RIG_SCORE:
0.7729
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G900R
TCGA-BF-A1PZ
SKCM
TCGA
NRPSLFGMP
DEG_APCC_DBOX_1
0.6457
p.G900R
DO50279
SKCM
ICGC
NRPSLFGMP
DEG_APCC_DBOX_1
0.6457
p.T911I
TCGA-DA-A95X
SKCM
TCGA
NRPSLFGMP
DEG_APCC_DBOX_1
0.0833
p.T911I
DO219480
SKCM
ICGC
NRPSLFGMP
DEG_APCC_DBOX_1
0.0833
p.R895C
TCGA-ER-A19F
SKCM
TCGA
NRPSLFGMP
DEG_APCC_DBOX_1
0.8301
p.R895C
DO37679
SKCM
ICGC
NRPSLFGMP
DEG_APCC_DBOX_1
0.8301
p.R895C
SIDM00425
Ovarian Carcinoma
GDSC
NRPSLFGMP
DEG_APCC_DBOX_1
0.8301
p.R895C
SIDM00986
Head and Neck Carcinoma
GDSC
NRPSLFGMP
DEG_APCC_DBOX_1
0.8301
p.R895C
BHY
upper_aerodigestive_tract
COSMIC
NRPSLFGMP
DEG_APCC_DBOX_1
0.8301
p.R895C
OVTOKO
ovary
COSMIC
NRPSLFGMP
DEG_APCC_DBOX_1
0.8301
p.R912Q
DO229016
COCA
ICGC
NRPSLFGMP
DEG_APCC_DBOX_1
0.0556
p.R912Q
DO229003
COCA
ICGC
NRPSLFGMP
DEG_APCC_DBOX_1
0.0556
p.R912Q
DO230993
LUSC
ICGC
NRPSLFGMP
DEG_APCC_DBOX_1
0.0556
p.R912Q
DO230990
LUSC
ICGC
NRPSLFGMP
DEG_APCC_DBOX_1
0.0556
p.R912Q
DO231049
LUSC
ICGC
NRPSLFGMP
DEG_APCC_DBOX_1
0.0556
p.L886P
SIDM01608
Endometrial Carcinoma
GDSC
NRPSLFGMP
DEG_APCC_DBOX_1
0.1111
p.L886P
ACH-000990
Endometrial/Uterine Cancer
CCLE
NRPSLFGMP
DEG_APCC_DBOX_1
0.1111
p.V909L
SIDM01766
Chondrosarcoma
GDSC
NRPSLFGMP
DEG_APCC_DBOX_1
0.1389
p.V909L
ACH-000418
Bone Cancer
CCLE
NRPSLFGMP
DEG_APCC_DBOX_1
0.1389
Drug responses associated with USP6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NRPSLFGMP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35125
Ubiquitin carboxyl-terminal hydrolase 6
DEG_APCC_DBOX_1
894:902
NRPSLFGMP
APC,CDC20,FZR1
0.778
More...