DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NRRCLEPLQ
Uniprot ID:
Q8N5Q1
Source protein:
Golgi associated RAB2 interactor protein 5B
Source gene:
GARIN5B
Class:
DEG_APCC_DBOX_1
Location:
6:14
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8568
ASA_SCORE:
110.2778
COIL:
0.9129
CONS_SCORE:
0.3045
DSS_SCORE:
0.2439
HELIX:
0.0549
FCONS_SCORE:
0.7566
RIG_SCORE:
0.8064
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R5Q
TCGA-EO-A22U
UCEC
TCGA
NRRCLEPLQ
DEG_APCC_DBOX_1
0.3056
p.R5Q
DO43755
UCEC
ICGC
NRRCLEPLQ
DEG_APCC_DBOX_1
0.3056
p.W19L
DO234269
ESAD
ICGC
NRRCLEPLQ
DEG_APCC_DBOX_1
0.1944
p.L13H
DO228278
LICA
ICGC
NRRCLEPLQ
DEG_APCC_DBOX_1
0.7313
p.N6K
DO229034
LICA
ICGC
NRRCLEPLQ
DEG_APCC_DBOX_1
0.5806
p.P17S
DO220906
MELA
ICGC
NRRCLEPLQ
DEG_APCC_DBOX_1
0.25
p.P17L
ACH-000720
Bladder Cancer
CCLE
NRRCLEPLQ
DEG_APCC_DBOX_1
0.25
p.P17L
TCCSUP
urinary_tract
COSMIC
NRRCLEPLQ
DEG_APCC_DBOX_1
0.25
p.C9Y
ACH-002026
Endometrial/Uterine Cancer
CCLE
NRRCLEPLQ
DEG_APCC_DBOX_1
0.5976
Drug responses associated with GARIN5B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NRRCLEPLQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N5Q1
Golgi associated RAB2 interactor protein 5B
DEG_APCC_DBOX_1
6:14
NRRCLEPLQ
APC,CDC20,FZR1
0.8568
More...