DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NRSKLSNVA
Uniprot ID:
Q8TC71
Source protein:
Mitochondria-eating protein
Source gene:
SPATA18
Class:
DEG_APCC_DBOX_1
Location:
289:297
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8367
ASA_SCORE:
88.6556
COIL:
0.6056
CONS_SCORE:
0.6535
DSS_SCORE:
0.5073
HELIX:
0.3563
FCONS_SCORE:
1.1761
RIG_SCORE:
0.6941
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R285K
TCGA-50-5932
LUAD
TCGA
NRSKLSNVA
DEG_APCC_DBOX_1
0.2222
p.R298S
TCGA-86-7954
LUAD
TCGA
NRSKLSNVA
DEG_APCC_DBOX_1
0.3056
p.A297V
TCGA-97-8552
LUAD
TCGA
NRSKLSNVA
DEG_APCC_DBOX_1
0.5825
p.L303V
TCGA-A5-A0G2
UCEC
TCGA
NRSKLSNVA
DEG_APCC_DBOX_1
0.1667
p.R290L
TCGA-BA-6868
HNSC
TCGA
NRSKLSNVA
DEG_APCC_DBOX_1
0.8428
p.R290L
DO228974
LICA
ICGC
NRSKLSNVA
DEG_APCC_DBOX_1
0.8428
p.L302F
TCGA-BB-7870
HNSC
TCGA
NRSKLSNVA
DEG_APCC_DBOX_1
0.1944
p.P286Q
TCGA-BR-A4QL
STAD
TCGA
NRSKLSNVA
DEG_APCC_DBOX_1
0.25
p.R290H
TCGA-BS-A0TC
UCEC
TCGA
NRSKLSNVA
DEG_APCC_DBOX_1
0.8244
p.R290H
SIDM00217
Colorectal Carcinoma
GDSC
NRSKLSNVA
DEG_APCC_DBOX_1
0.8244
p.R290H
SIDM01611
Endometrial Carcinoma
GDSC
NRSKLSNVA
DEG_APCC_DBOX_1
0.8244
p.R290H
SNU-1040
large_intestine
COSMIC
NRSKLSNVA
DEG_APCC_DBOX_1
0.8244
p.R284W
TCGA-CC-A7IK
LIHC
TCGA
NRSKLSNVA
DEG_APCC_DBOX_1
0.1944
p.S304P
TCGA-CM-5861
COAD
TCGA
NRSKLSNVA
DEG_APCC_DBOX_1
0.1389
p.R305W
TCGA-D3-A51G
SKCM
TCGA
NRSKLSNVA
DEG_APCC_DBOX_1
0.1111
p.S291C
TCGA-MV-A51V
BLCA
TCGA
NRSKLSNVA
DEG_APCC_DBOX_1
0.643
p.S294F
TCGA-WE-A8ZT
SKCM
TCGA
NRSKLSNVA
DEG_APCC_DBOX_1
0.6871
p.R282C
DO233652
GACA
ICGC
NRSKLSNVA
DEG_APCC_DBOX_1
0.25
p.D294Y
DO23556
LUAD
ICGC
NRSKLSNVA
DEG_APCC_DBOX_1
0.7325
p.R282H
DO27849
MALY
ICGC
NRSKLSNVA
DEG_APCC_DBOX_1
0.25
p.A285V
DO38380
STAD
ICGC
NRSKLSNVA
DEG_APCC_DBOX_1
0.2222
p.R301Q
DO47925
STAD
ICGC
NRSKLSNVA
DEG_APCC_DBOX_1
0.2222
p.R301W
DO43122
UCEC
ICGC
NRSKLSNVA
DEG_APCC_DBOX_1
0.2222
p.D294N
DO41903
UCEC
ICGC
NRSKLSNVA
DEG_APCC_DBOX_1
0.6932
p.S287F
SIDM00277
Acute Myeloid Leukemia
GDSC
NRSKLSNVA
DEG_APCC_DBOX_1
0.2778
p.S287F
ACH-000198
Leukemia
CCLE
NRSKLSNVA
DEG_APCC_DBOX_1
0.2778
p.S287F
EoL-1-cell
haematopoietic_and_lymphoid_tissue
COSMIC
NRSKLSNVA
DEG_APCC_DBOX_1
0.2778
p.A280T
SIDM00690
Head and Neck Carcinoma
GDSC
NRSKLSNVA
DEG_APCC_DBOX_1
0.0833
p.A280T
SIDM00596
Endometrial Carcinoma
GDSC
NRSKLSNVA
DEG_APCC_DBOX_1
0.0833
p.P286A
SIDM00929
Chondrosarcoma
GDSC
NRSKLSNVA
DEG_APCC_DBOX_1
0.25
p.P286A
SIDM00118
Colorectal Carcinoma
GDSC
NRSKLSNVA
DEG_APCC_DBOX_1
0.25
p.K292N
SIDM00138
Non-Small Cell Lung Carcinoma
GDSC
NRSKLSNVA
DEG_APCC_DBOX_1
0.5806
p.K292N
ACH-000900
Lung Cancer
CCLE
NRSKLSNVA
DEG_APCC_DBOX_1
0.5806
p.K292N
NCI-H23
lung
COSMIC
NRSKLSNVA
DEG_APCC_DBOX_1
0.5806
p.V281I
SIDM00954
Breast Carcinoma
GDSC
NRSKLSNVA
DEG_APCC_DBOX_1
0.1111
p.V281I
COLO-824
breast
COSMIC
NRSKLSNVA
DEG_APCC_DBOX_1
0.1111
p.R298C
SIDM00951
T-Lymphoblastic Leukemia
GDSC
NRSKLSNVA
DEG_APCC_DBOX_1
0.3056
p.R298C
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
NRSKLSNVA
DEG_APCC_DBOX_1
0.3056
p.T279I
SIDM01424
B-Lymphoblastic Leukemia
GDSC
NRSKLSNVA
DEG_APCC_DBOX_1
0.0556
p.L283V
ACH-000323
Brain Cancer
CCLE
NRSKLSNVA
DEG_APCC_DBOX_1
0.1667
p.L283V
42-MG-BA
central_nervous_system
COSMIC
NRSKLSNVA
DEG_APCC_DBOX_1
0.1667
p.R282P
ACH-000843
Lung Cancer
CCLE
NRSKLSNVA
DEG_APCC_DBOX_1
0.25
p.R282P
HARA
lung
COSMIC
NRSKLSNVA
DEG_APCC_DBOX_1
0.25
p.D284N
ACH-000990
Endometrial/Uterine Cancer
CCLE
NRSKLSNVA
DEG_APCC_DBOX_1
0.1944
Drug responses associated with SPATA18 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NRSKLSNVA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TC71
Mitochondria-eating protein
DEG_APCC_DBOX_1
289:297
NRSKLSNVA
APC,CDC20,FZR1
0.8367
More...