DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NRVSLEKVL
Uniprot ID:
O43379
Source protein:
WD repeat-containing protein 62
Source gene:
WDR62
Class:
DEG_APCC_DBOX_1
Location:
58:66
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9605
ASA_SCORE:
54.8
COIL:
0.2246
CONS_SCORE:
0.415
DSS_SCORE:
0.339
HELIX:
0.053
FCONS_SCORE:
1.1626
RIG_SCORE:
0.8286
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G75V
TCGA-21-5786
LUSC
TCGA
NRVSLEKVL
DEG_APCC_DBOX_1
0.0833
p.G75V
DO26830
LUSC
ICGC
NRVSLEKVL
DEG_APCC_DBOX_1
0.0833
p.G75V
SIDM01129
Small Cell Lung Carcinoma
GDSC
NRVSLEKVL
DEG_APCC_DBOX_1
0.0833
p.G75V
ACH-000816
Lung Cancer
CCLE
NRVSLEKVL
DEG_APCC_DBOX_1
0.0833
p.G75V
NCI-H524
lung
COSMIC
NRVSLEKVL
DEG_APCC_DBOX_1
0.0833
p.R59L
TCGA-68-7757
LUSC
TCGA
NRVSLEKVL
DEG_APCC_DBOX_1
0.8428
p.R59L
DO26886
LUSC
ICGC
NRVSLEKVL
DEG_APCC_DBOX_1
0.8428
p.E54K
TCGA-CK-4951
COAD
TCGA
NRVSLEKVL
DEG_APCC_DBOX_1
0.2222
p.E54K
DO10582
COAD
ICGC
NRVSLEKVL
DEG_APCC_DBOX_1
0.2222
p.E63D
DO229013
COCA
ICGC
NRVSLEKVL
DEG_APCC_DBOX_1
0.5647
p.E63K
DO27893
ORCA
ICGC
NRVSLEKVL
DEG_APCC_DBOX_1
0.591
p.A51T
DO232761
PBCA
ICGC
NRVSLEKVL
DEG_APCC_DBOX_1
0.1389
p.L66F
DO38404
STAD
ICGC
NRVSLEKVL
DEG_APCC_DBOX_1
0.587
p.S49W
SIDM00633
Breast Carcinoma
GDSC
NRVSLEKVL
DEG_APCC_DBOX_1
0.5278
p.Q57H
SIDM00245
Small Cell Lung Carcinoma
GDSC
NRVSLEKVL
DEG_APCC_DBOX_1
0.3056
p.L76I
ACH-000981
Leukemia
CCLE
NRVSLEKVL
DEG_APCC_DBOX_1
0.0556
Drug responses associated with WDR62 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NRVSLEKVL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43379
WD repeat-containing protein 62
DEG_APCC_DBOX_1
58:66
NRVSLEKVL
APC,CDC20,FZR1
0.9605
More...