DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NRWGLPEVD
Uniprot ID:
Q12882
Source protein:
Dihydropyrimidine dehydrogenase [NADP
Source gene:
DPYD
Class:
DEG_APCC_DBOX_1
Location:
457:465
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8315
ASA_SCORE:
55.7111
COIL:
0.6811
CONS_SCORE:
0.4368
DSS_SCORE:
0.3567
HELIX:
0.0147
FCONS_SCORE:
1.1111
RIG_SCORE:
0.8012
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L461I
TCGA-06-5416
GBM
TCGA
NRWGLPEVD
DEG_APCC_DBOX_1
0.7174
p.L461I
TCGA-AA-3510
COAD
TCGA
NRWGLPEVD
DEG_APCC_DBOX_1
0.7174
p.L461I
DO7783
COAD
ICGC
NRWGLPEVD
DEG_APCC_DBOX_1
0.7174
p.L461I
DO10880
GBM
ICGC
NRWGLPEVD
DEG_APCC_DBOX_1
0.7174
p.L461I
DO232761
PBCA
ICGC
NRWGLPEVD
DEG_APCC_DBOX_1
0.7174
p.R458K
TCGA-18-3409
LUSC
TCGA
NRWGLPEVD
DEG_APCC_DBOX_1
0.7237
p.R458K
TCGA-DD-AADO
LIHC
TCGA
NRWGLPEVD
DEG_APCC_DBOX_1
0.7237
p.R458K
DO52241
LIHC
ICGC
NRWGLPEVD
DEG_APCC_DBOX_1
0.7237
p.R458K
DO26444
LUSC
ICGC
NRWGLPEVD
DEG_APCC_DBOX_1
0.7237
p.N457Y
TCGA-50-5946
LUAD
TCGA
NRWGLPEVD
DEG_APCC_DBOX_1
0.5948
p.N457Y
DO24556
LUAD
ICGC
NRWGLPEVD
DEG_APCC_DBOX_1
0.5948
p.I454V
TCGA-60-2703
LUSC
TCGA
NRWGLPEVD
DEG_APCC_DBOX_1
0.25
p.I454V
DO27715
LUSC
ICGC
NRWGLPEVD
DEG_APCC_DBOX_1
0.25
p.Q470H
TCGA-A5-A0G1
UCEC
TCGA
NRWGLPEVD
DEG_APCC_DBOX_1
0.1944
p.Q470H
DO42472
UCEC
ICGC
NRWGLPEVD
DEG_APCC_DBOX_1
0.1944
p.V447L
TCGA-AZ-6601
COAD
TCGA
NRWGLPEVD
DEG_APCC_DBOX_1
0.0556
p.V447L
DO8119
COAD
ICGC
NRWGLPEVD
DEG_APCC_DBOX_1
0.0556
p.T471S
TCGA-CR-7371
HNSC
TCGA
NRWGLPEVD
DEG_APCC_DBOX_1
0.1667
p.T471S
DO15454
HNSC
ICGC
NRWGLPEVD
DEG_APCC_DBOX_1
0.1667
p.P466L
TCGA-D3-A8GP
SKCM
TCGA
NRWGLPEVD
DEG_APCC_DBOX_1
0.3056
p.P466L
DO51244
SKCM
ICGC
NRWGLPEVD
DEG_APCC_DBOX_1
0.3056
p.P462Q
TCGA-G7-6797
KIRP
TCGA
NRWGLPEVD
DEG_APCC_DBOX_1
0.5924
p.P462Q
DO20917
KIRP
ICGC
NRWGLPEVD
DEG_APCC_DBOX_1
0.5924
p.E473K
DO229456
SKCA
ICGC
NRWGLPEVD
DEG_APCC_DBOX_1
0.1111
p.E473K
SIDM01068
Non-Small Cell Lung Carcinoma
GDSC
NRWGLPEVD
DEG_APCC_DBOX_1
0.1111
p.E473K
ACH-000562
Lung Cancer
CCLE
NRWGLPEVD
DEG_APCC_DBOX_1
0.1111
p.E473K
HCC-78
lung
COSMIC
NRWGLPEVD
DEG_APCC_DBOX_1
0.1111
p.L451F
SIDM00955
Melanoma
GDSC
NRWGLPEVD
DEG_APCC_DBOX_1
0.1667
p.L451F
ACH-000812
Skin Cancer
CCLE
NRWGLPEVD
DEG_APCC_DBOX_1
0.1667
p.L451F
COLO-783
skin
COSMIC
NRWGLPEVD
DEG_APCC_DBOX_1
0.1667
p.A450V
SIDM00048
Non-Small Cell Lung Carcinoma
GDSC
NRWGLPEVD
DEG_APCC_DBOX_1
0.1389
Drug responses associated with DPYD mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NRWGLPEVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12882
Dihydropyrimidine dehydrogenase [NADP
DEG_APCC_DBOX_1
457:465
NRWGLPEVD
APC,CDC20,FZR1
0.8315
More...