DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
NRYDLLCLE
Uniprot ID:
Q9NSD9
Source protein:
Phenylalanine--tRNA ligase beta subunit
Source gene:
FARSB
Class:
DEG_APCC_DBOX_1
Location:
70:78
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8826
ASA_SCORE:
23.1889
COIL:
0.6307
CONS_SCORE:
0.6813
DSS_SCORE:
0.022
HELIX:
0.34
FCONS_SCORE:
1.3076
RIG_SCORE:
0.9522
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L62I
TCGA-AC-A23H
BRCA
TCGA
NRYDLLCLE
DEG_APCC_DBOX_1
0.1111
p.L62I
DO2401
BRCA
ICGC
NRYDLLCLE
DEG_APCC_DBOX_1
0.1111
p.R82Q
TCGA-AJ-A5DW
UCEC
TCGA
NRYDLLCLE
DEG_APCC_DBOX_1
0.2222
p.R82Q
DO50075
UCEC
ICGC
NRYDLLCLE
DEG_APCC_DBOX_1
0.2222
p.P68S
TCGA-EB-A430
SKCM
TCGA
NRYDLLCLE
DEG_APCC_DBOX_1
0.2778
p.P68S
DO37906
SKCM
ICGC
NRYDLLCLE
DEG_APCC_DBOX_1
0.2778
p.A69T
TCGA-EO-A22U
UCEC
TCGA
NRYDLLCLE
DEG_APCC_DBOX_1
0.3056
p.A69T
DO43755
UCEC
ICGC
NRYDLLCLE
DEG_APCC_DBOX_1
0.3056
p.V67I
TCGA-G9-6371
PRAD
TCGA
NRYDLLCLE
DEG_APCC_DBOX_1
0.25
p.V67I
DO36314
PRAD
ICGC
NRYDLLCLE
DEG_APCC_DBOX_1
0.25
p.D66H
TCGA-W3-A828
SKCM
TCGA
NRYDLLCLE
DEG_APCC_DBOX_1
0.2222
p.D66H
DO51273
SKCM
ICGC
NRYDLLCLE
DEG_APCC_DBOX_1
0.2222
p.N70D
TCGA-XE-AAOB
TGCT
TCGA
NRYDLLCLE
DEG_APCC_DBOX_1
0.5821
p.R71T
DO71752
THCA
ICGC
NRYDLLCLE
DEG_APCC_DBOX_1
0.7876
p.G79V
SIDM00230
Small Cell Lung Carcinoma
GDSC
NRYDLLCLE
DEG_APCC_DBOX_1
0.3056
p.G79V
ACH-002145
Lung Cancer
CCLE
NRYDLLCLE
DEG_APCC_DBOX_1
0.3056
p.G79V
IST-SL2
lung
COSMIC
NRYDLLCLE
DEG_APCC_DBOX_1
0.3056
p.L75M
SIDM00333
Endometrial Carcinoma
GDSC
NRYDLLCLE
DEG_APCC_DBOX_1
0.5999
p.L75M
ACH-000988
Endometrial/Uterine Cancer
CCLE
NRYDLLCLE
DEG_APCC_DBOX_1
0.5999
p.L75M
MFE-319
endometrium
COSMIC
NRYDLLCLE
DEG_APCC_DBOX_1
0.5999
Drug responses associated with FARSB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NRYDLLCLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NSD9
Phenylalanine--tRNA ligase beta subunit
DEG_APCC_DBOX_1
70:78
NRYDLLCLE
APC,CDC20,FZR1
0.8826
More...