DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
NSERTPYK
Uniprot ID:
O76083
Source protein:
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
Source gene:
PDE9A
Class:
DEG_SCF_SKP2-CKS1_1
Location:
70:77
E3 ligase:
SKP2,CSK1
DEGRON score:
0.9736
ASA_SCORE:
87.9
COIL:
0.795
CONS_SCORE:
0.3814
DSS_SCORE:
0.5364
HELIX:
0.0296
FCONS_SCORE:
0.9215
RIG_SCORE:
0.724
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R73C
TCGA-A5-A0G2
UCEC
TCGA
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.719
p.R73C
TCGA-AJ-A3OJ
UCEC
TCGA
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.719
p.R73C
TCGA-EO-A22S
UCEC
TCGA
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.719
p.P75Q
TCGA-AX-A2HC
UCEC
TCGA
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.7035
p.A69T
TCGA-AX-A2HD
UCEC
TCGA
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.3056
p.A69T
TCGA-CC-A7IJ
LIHC
TCGA
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.3056
p.A69T
TCGA-DF-A2KZ
UCEC
TCGA
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.3056
p.A69T
TCGA-EA-A410
CESC
TCGA
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.3056
p.P75L
TCGA-D5-6927
COAD
TCGA
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.7582
p.K84N
TCGA-IB-7651
PAAD
TCGA
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.25
p.E77D
DO224768
BRCA
ICGC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.6758
p.R85H
DO9876
COAD
ICGC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.1111
p.R85H
NCI-H1155
lung
COSMIC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.1111
p.R83C
DO234257
ESAD
ICGC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.1667
p.R83C
DO37444
SKCM
ICGC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.1667
p.R83H
DO234308
ESAD
ICGC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.1667
p.A65S
DO229029
LICA
ICGC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.1944
p.E65D
DO45433
LUSC
ICGC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.1944
p.E65K
DO45433
LUSC
ICGC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.1944
p.F87I
DO220886
MELA
ICGC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.5
p.A61S
DO46657
PAAD
ICGC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.0833
p.V64G
DO47813
STAD
ICGC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.1667
p.A76S
DO38312
STAD
ICGC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.7588
p.V75F
DO43186
UCEC
ICGC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.7068
p.V86G
DO41608
UCEC
ICGC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.0833
p.L63I
DO41572
UCEC
ICGC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.1389
p.G72C
NCI-H838
lung
COSMIC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.76
p.E74K
A2058
skin
COSMIC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.7022
p.R86H
NCI-H1155
lung
COSMIC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.0833
p.P68L
IM-95
stomach
COSMIC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.2778
p.P68L
TE-15
oesophagus
COSMIC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.2778
p.R60H
NCI-H1155
lung
COSMIC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.0556
p.N70D
SU-DHL-8
NS
COSMIC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.5821
p.S71N
CCRF-CEM
haematopoietic_and_lymphoid_tissue
COSMIC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.5958
p.I78T
CAL-72
bone
COSMIC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.3056
p.G87C
NCI-H838
lung
COSMIC
NSERTPYK
DEG_SCF_SKP2-CKS1_1
0.5
Drug responses associated with PDE9A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NSERTPYK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O76083
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
DEG_SCF_SKP2-CKS1_1
70:77
NSERTPYK
SKP2,CSK1
0.9736
More...