DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NSESGE
Uniprot ID:
P67809
Source protein:
Y-box-binding protein 1
Source gene:
YBX1
Class:
DEG_Kelch_Keap1_1
Location:
164:169
E3 ligase:
KEAP1
DEGRON score:
0.8975
ASA_SCORE:
76.8333
COIL:
0.8443
CONS_SCORE:
0.281
DSS_SCORE:
0.7592
HELIX:
0.0768
FCONS_SCORE:
0.9548
RIG_SCORE:
0.5336
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R156H
TCGA-B5-A11E
UCEC
TCGA
NSESGE
DEG_Kelch_Keap1_1
0.1111
p.R156H
DO41644
UCEC
ICGC
NSESGE
DEG_Kelch_Keap1_1
0.1111
p.R156H
SIDM00217
Colorectal Carcinoma
GDSC
NSESGE
DEG_Kelch_Keap1_1
0.1111
p.R156H
ACH-000999
Colon/Colorectal Cancer
CCLE
NSESGE
DEG_Kelch_Keap1_1
0.1111
p.R156H
SNU-1040
large_intestine
COSMIC
NSESGE
DEG_Kelch_Keap1_1
0.1111
p.G168E
DO50970
LICA
ICGC
NSESGE
DEG_Kelch_Keap1_1
0.7199
p.P178T
DO229275
THCA
ICGC
NSESGE
DEG_Kelch_Keap1_1
0.0833
p.Q159L
DO229224
THCA
ICGC
NSESGE
DEG_Kelch_Keap1_1
0.1944
p.Q159L
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
NSESGE
DEG_Kelch_Keap1_1
0.1944
p.E169A
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
NSESGE
DEG_Kelch_Keap1_1
0.7701
Drug responses associated with YBX1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NSESGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15446
DNA-directed RNA polymerase I subunit RPA34
DEG_Kelch_Keap1_1
487:492
NSESGE
KEAP1
0.9912
More...
P67809
Y-box-binding protein 1
DEG_Kelch_Keap1_1
164:169
NSESGE
KEAP1
0.8975
More...