DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
NYMYSTAP
Uniprot ID:
Q15118
Source protein:
[Pyruvate dehydrogenase
Source gene:
PDK1
Class:
CBL_PTK
Location:
333:340
E3 ligase:
CBL
DEGRON score:
0.9453
ASA_SCORE:
59.3
COIL:
0.6313
CONS_SCORE:
0.6746
DSS_SCORE:
0.2643
HELIX:
0.1588
FCONS_SCORE:
1.3477
RIG_SCORE:
0.8063
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L325F
TCGA-17-Z022
LUAD
TCGA
NYMYSTAP
CBL_PTK
0.1111
p.V323I
TCGA-A5-A2K3
UCEC
TCGA
NYMYSTAP
CBL_PTK
0.0556
p.V323I
DO43899
UCEC
ICGC
NYMYSTAP
CBL_PTK
0.0556
p.R343H
TCGA-BG-A222
UCEC
TCGA
NYMYSTAP
CBL_PTK
0.25
p.R343H
DO42977
UCEC
ICGC
NYMYSTAP
CBL_PTK
0.25
p.R343H
ACH-001049
Lung Cancer
CCLE
NYMYSTAP
CBL_PTK
0.25
p.R343H
CPC-N
lung
COSMIC
NYMYSTAP
CBL_PTK
0.25
p.P324S
TCGA-EE-A2MJ
SKCM
TCGA
NYMYSTAP
CBL_PTK
0.0833
p.P324S
DO38099
SKCM
ICGC
NYMYSTAP
CBL_PTK
0.0833
p.A349T
TCGA-IR-A3LK
CESC
TCGA
NYMYSTAP
CBL_PTK
0.0833
p.A349T
DO44299
CESC
ICGC
NYMYSTAP
CBL_PTK
0.0833
p.A349T
RCH-ACV
haematopoietic_and_lymphoid_tissue
COSMIC
NYMYSTAP
CBL_PTK
0.0833
p.A349T
SNU-1040
large_intestine
COSMIC
NYMYSTAP
CBL_PTK
0.0833
p.A349T
DG-75
haematopoietic_and_lymphoid_tissue
COSMIC
NYMYSTAP
CBL_PTK
0.0833
p.E345Q
TCGA-Q1-A73O
CESC
TCGA
NYMYSTAP
CBL_PTK
0.1944
p.E345Q
DO51612
CESC
ICGC
NYMYSTAP
CBL_PTK
0.1944
p.T338S
TCGA-XK-AAJT
PRAD
TCGA
NYMYSTAP
CBL_PTK
0.7116
p.T338S
DO51414
PRAD
ICGC
NYMYSTAP
CBL_PTK
0.7116
p.R330I
DO233737
GACA
ICGC
NYMYSTAP
CBL_PTK
0.25
p.R343L
DO229031
LICA
ICGC
NYMYSTAP
CBL_PTK
0.25
p.T326M
SIDM00656
Burkitt's Lymphoma
GDSC
NYMYSTAP
CBL_PTK
0.1389
p.R348H
KM12
large_intestine
COSMIC
NYMYSTAP
CBL_PTK
0.1111
Drug responses associated with PDK1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NYMYSTAP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15118
[Pyruvate dehydrogenase
CBL_PTK
333:340
NYMYSTAP
CBL
0.9453
More...