DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PAATPHLS
Uniprot ID:
O15054
Source protein:
Lysine-specific demethylase 6B
Source gene:
KDM6B
Class:
DEG_SCF_FBW7_1
Location:
453:460
E3 ligase:
FBXW7
DEGRON score:
0.923
ASA_SCORE:
93.6
COIL:
0.952
CONS_SCORE:
0.4719
DSS_SCORE:
0.6458
HELIX:
0.0209
FCONS_SCORE:
1.1531
RIG_SCORE:
0.5549
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P470A
TCGA-33-4538
LUSC
TCGA
PAATPHLS
DEG_SCF_FBW7_1
0.0556
p.P470A
DO26695
LUSC
ICGC
PAATPHLS
DEG_SCF_FBW7_1
0.0556
p.R446L
TCGA-D3-A2JB
SKCM
TCGA
PAATPHLS
DEG_SCF_FBW7_1
0.1389
p.R446L
DO47607
SKCM
ICGC
PAATPHLS
DEG_SCF_FBW7_1
0.1389
p.S444I
TCGA-IB-7651
PAAD
TCGA
PAATPHLS
DEG_SCF_FBW7_1
0.0833
p.S444I
DO46657
PAAD
ICGC
PAATPHLS
DEG_SCF_FBW7_1
0.0833
p.R446W
TCGA-MY-A913
CESC
TCGA
PAATPHLS
DEG_SCF_FBW7_1
0.1389
p.R446W
DO49980
CESC
ICGC
PAATPHLS
DEG_SCF_FBW7_1
0.1389
p.R446W
SIDM00660
Colorectal Carcinoma
GDSC
PAATPHLS
DEG_SCF_FBW7_1
0.1389
p.R446W
ACH-000985
Colon/Colorectal Cancer
CCLE
PAATPHLS
DEG_SCF_FBW7_1
0.1389
p.R446W
LS-411N
large_intestine
COSMIC
PAATPHLS
DEG_SCF_FBW7_1
0.1389
p.A454D
DO50387
ESAD
ICGC
PAATPHLS
DEG_SCF_FBW7_1
0.6682
p.P448L
DO37432
SKCM
ICGC
PAATPHLS
DEG_SCF_FBW7_1
0.1944
Drug responses associated with KDM6B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PAATPHLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15054
Lysine-specific demethylase 6B
DEG_SCF_FBW7_1
453:460
PAATPHLS
FBXW7
0.923
More...