DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PADVTPEK
Uniprot ID:
Q8IXI1
Source protein:
Mitochondrial Rho GTPase 2
Source gene:
RHOT2
Class:
DEG_SCF_SKP2-CKS1_1
Location:
43:50
E3 ligase:
SKP2,CSK1
DEGRON score:
0.8631
ASA_SCORE:
68.95
COIL:
0.6606
CONS_SCORE:
0.6053
DSS_SCORE:
0.528
HELIX:
0.0315
FCONS_SCORE:
0.9944
RIG_SCORE:
0.7142
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P48Q
TCGA-CX-7219
HNSC
TCGA
PADVTPEK
DEG_SCF_SKP2-CKS1_1
0.7035
p.P48Q
DO14910
HNSC
ICGC
PADVTPEK
DEG_SCF_SKP2-CKS1_1
0.7035
p.P52H
TCGA-EE-A17Y
SKCM
TCGA
PADVTPEK
DEG_SCF_SKP2-CKS1_1
0.2778
p.P52H
DO47459
SKCM
ICGC
PADVTPEK
DEG_SCF_SKP2-CKS1_1
0.2778
p.E39D
TCGA-IB-7651
PAAD
TCGA
PADVTPEK
DEG_SCF_SKP2-CKS1_1
0.2222
p.E39D
DO46657
PAAD
ICGC
PADVTPEK
DEG_SCF_SKP2-CKS1_1
0.2222
p.A44E
SIDM00241
Breast Carcinoma
GDSC
PADVTPEK
DEG_SCF_SKP2-CKS1_1
0.659
p.A44E
ACH-002179
Breast Cancer
CCLE
PADVTPEK
DEG_SCF_SKP2-CKS1_1
0.659
p.A44E
OCUB-M
breast
COSMIC
PADVTPEK
DEG_SCF_SKP2-CKS1_1
0.659
p.T41P
ACH-002247
Non-Cancerous
CCLE
PADVTPEK
DEG_SCF_SKP2-CKS1_1
0.2778
p.T41P
IM-9
haematopoietic_and_lymphoid_tissue
COSMIC
PADVTPEK
DEG_SCF_SKP2-CKS1_1
0.2778
Drug responses associated with RHOT2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PADVTPEK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IXI1
Mitochondrial Rho GTPase 2
DEG_SCF_SKP2-CKS1_1
43:50
PADVTPEK
SKP2,CSK1
0.8631
More...