DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PAGTPLSE
Uniprot ID:
Q7Z5J4
Source protein:
Retinoic acid-induced protein 1
Source gene:
RAI1
Class:
DEG_SCF_FBW7_2
Location:
492:499
E3 ligase:
FBXW7
DEGRON score:
0.9754
ASA_SCORE:
92.1125
COIL:
0.955
CONS_SCORE:
0.6329
DSS_SCORE:
0.8205
HELIX:
0.0161
FCONS_SCORE:
1.0925
RIG_SCORE:
0.5134
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E491V
TCGA-12-0818
GBM
TCGA
PAGTPLSE
DEG_SCF_FBW7_2
0.3056
p.E491V
DO12892
GBM
ICGC
PAGTPLSE
DEG_SCF_FBW7_2
0.3056
p.S482R
TCGA-CM-6674
COAD
TCGA
PAGTPLSE
DEG_SCF_FBW7_2
0.0556
p.S482R
DO10092
COAD
ICGC
PAGTPLSE
DEG_SCF_FBW7_2
0.0556
p.P483H
TCGA-EE-A2M8
SKCM
TCGA
PAGTPLSE
DEG_SCF_FBW7_2
0.0833
p.P483H
DO222404
BTCA
ICGC
PAGTPLSE
DEG_SCF_FBW7_2
0.0833
p.P483H
DO38075
SKCM
ICGC
PAGTPLSE
DEG_SCF_FBW7_2
0.0833
p.A493T
TCGA-EY-A549
UCEC
TCGA
PAGTPLSE
DEG_SCF_FBW7_2
0.6028
p.A493T
DO48174
UCEC
ICGC
PAGTPLSE
DEG_SCF_FBW7_2
0.6028
p.E491K
DO51501
PACA
ICGC
PAGTPLSE
DEG_SCF_FBW7_2
0.3056
p.A493V
SNU-1040
large_intestine
COSMIC
PAGTPLSE
DEG_SCF_FBW7_2
0.5825
Drug responses associated with RAI1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PAGTPLSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z5J4
Retinoic acid-induced protein 1
DEG_SCF_FBW7_2
492:499
PAGTPLSE
FBXW7
0.9754
More...