DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PAMTPSKE
Uniprot ID:
O95819
Source protein:
Mitogen-activated protein kinase kinase kinase kinase 4
Source gene:
MAP4K4
Class:
DEG_SCF_FBW7_2
Location:
825:832
E3 ligase:
FBXW7
DEGRON score:
0.989
ASA_SCORE:
81.55
COIL:
0.8751
CONS_SCORE:
0.2651
DSS_SCORE:
0.628
HELIX:
0.0654
FCONS_SCORE:
0.9823
RIG_SCORE:
0.6801
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T828A
TCGA-EE-A182
SKCM
TCGA
PAMTPSKE
DEG_SCF_FBW7_2
0.825
p.E832V
HCT-116
large_intestine
COSMIC
PAMTPSKE
DEG_SCF_FBW7_2
0.7693
p.E828V
HCT-116
large_intestine
COSMIC
PAMTPSKE
DEG_SCF_FBW7_2
0.7693
p.Y834C
DO26250
LUAD
ICGC
PAMTPSKE
DEG_SCF_FBW7_2
0.7222
p.P829Q
TCGA-D3-A1Q6
SKCM
TCGA
PAMTPSKE
DEG_SCF_FBW7_2
0.7035
p.G827S
SIDM00084
Glioblastoma
GDSC
PAMTPSKE
DEG_SCF_FBW7_2
0.6993
p.G827S
SF295
central_nervous_system
COSMIC
PAMTPSKE
DEG_SCF_FBW7_2
0.6993
p.G826S
SF295
central_nervous_system
COSMIC
PAMTPSKE
DEG_SCF_FBW7_2
0.6993
p.S842F
TCGA-GN-A4U4
SKCM
TCGA
PAMTPSKE
DEG_SCF_FBW7_2
0.5
p.V833I
BL-41
haematopoietic_and_lymphoid_tissue
COSMIC
PAMTPSKE
DEG_SCF_FBW7_2
0.3056
p.L835I
TCGA-AP-A1DV
UCEC
TCGA
PAMTPSKE
DEG_SCF_FBW7_2
0.25
p.L835F
DO228648
GACA
ICGC
PAMTPSKE
DEG_SCF_FBW7_2
0.25
p.D822N
DO27652
LUSC
ICGC
PAMTPSKE
DEG_SCF_FBW7_2
0.25
p.E835K
DO48665
SKCM
ICGC
PAMTPSKE
DEG_SCF_FBW7_2
0.25
p.G821V
DO47100
RECA
ICGC
PAMTPSKE
DEG_SCF_FBW7_2
0.2222
p.S821N
DO42280
UCEC
ICGC
PAMTPSKE
DEG_SCF_FBW7_2
0.2222
p.I837N
DO18938
KIRC
ICGC
PAMTPSKE
DEG_SCF_FBW7_2
0.1944
p.V837I
BL-41
haematopoietic_and_lymphoid_tissue
COSMIC
PAMTPSKE
DEG_SCF_FBW7_2
0.1944
p.S841I
NCI-H1693
lung
COSMIC
PAMTPSKE
DEG_SCF_FBW7_2
0.0833
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Drug responses associated with MAP4K4 mutations
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Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of PAMTPSKE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95819
Mitogen-activated protein kinase kinase kinase kinase 4
DEG_SCF_FBW7_2
825:832
PAMTPSKE
FBXW7
0.989
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