DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PAPTPSSS
Uniprot ID:
Q9UBU9
Source protein:
Nuclear RNA export factor 1
Source gene:
NXF1
Class:
DEG_SCF_FBW7_1
Location:
551:558
E3 ligase:
FBXW7
DEGRON score:
0.9951
ASA_SCORE:
77.6875
COIL:
0.9528
CONS_SCORE:
0.4576
DSS_SCORE:
0.6094
HELIX:
0.0198
FCONS_SCORE:
1.3377
RIG_SCORE:
0.5664
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R546I
TCGA-A5-A1OF
UCEC
TCGA
PAPTPSSS
DEG_SCF_FBW7_1
0.1944
p.R546I
DO42568
UCEC
ICGC
PAPTPSSS
DEG_SCF_FBW7_1
0.1944
p.P551T
TCGA-B5-A3FC
UCEC
TCGA
PAPTPSSS
DEG_SCF_FBW7_1
0.7031
p.P551T
DO41871
UCEC
ICGC
PAPTPSSS
DEG_SCF_FBW7_1
0.7031
p.A549T
TCGA-B5-A3FC
UCEC
TCGA
PAPTPSSS
DEG_SCF_FBW7_1
0.2778
p.A549T
TCGA-OR-A5J5
ACC
TCGA
PAPTPSSS
DEG_SCF_FBW7_1
0.2778
p.A549T
DO41871
UCEC
ICGC
PAPTPSSS
DEG_SCF_FBW7_1
0.2778
p.A549T
SIDM00145
T-Lymphoblastic Leukemia
GDSC
PAPTPSSS
DEG_SCF_FBW7_1
0.2778
p.A549T
ACH-001127
Leukemia
CCLE
PAPTPSSS
DEG_SCF_FBW7_1
0.2778
p.A549T
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
PAPTPSSS
DEG_SCF_FBW7_1
0.2778
p.S558R
DO49675
LIAD
ICGC
PAPTPSSS
DEG_SCF_FBW7_1
0.8538
p.S558R
DO22802
LICA
ICGC
PAPTPSSS
DEG_SCF_FBW7_1
0.8538
p.S564F
SIDM01300
Colorectal Carcinoma
GDSC
PAPTPSSS
DEG_SCF_FBW7_1
0.6111
p.P555S
SIDM00999
Bladder Carcinoma
GDSC
PAPTPSSS
DEG_SCF_FBW7_1
0.6752
p.P555S
ACH-000973
Bladder Cancer
CCLE
PAPTPSSS
DEG_SCF_FBW7_1
0.6752
p.P555S
639-V
urinary_tract
COSMIC
PAPTPSSS
DEG_SCF_FBW7_1
0.6752
Drug responses associated with NXF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PAPTPSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UBU9
Nuclear RNA export factor 1
DEG_SCF_FBW7_1
551:558
PAPTPSSS
FBXW7
0.9951
More...