DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PARTPTQE
Uniprot ID:
Q8IY17
Source protein:
Patatin-like phospholipase domain-containing protein 6
Source gene:
PNPLA6
Class:
DEG_SCF_FBW7_2
Location:
461:468
E3 ligase:
FBXW7
DEGRON score:
0.9438
ASA_SCORE:
90.15
COIL:
0.8923
CONS_SCORE:
0.3532
DSS_SCORE:
0.7008
HELIX:
0.0389
FCONS_SCORE:
1.2693
RIG_SCORE:
0.6435
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E471V
TCGA-33-A5GW
LUSC
TCGA
PARTPTQE
DEG_SCF_FBW7_2
0.25
p.S454P
TCGA-3N-A9WC
SKCM
TCGA
PARTPTQE
DEG_SCF_FBW7_2
0.1389
p.R463Q
TCGA-AJ-A3EK
UCEC
TCGA
PARTPTQE
DEG_SCF_FBW7_2
0.6218
p.R463Q
TCGA-EO-A22U
UCEC
TCGA
PARTPTQE
DEG_SCF_FBW7_2
0.6218
p.R463Q
TCGA-HU-8602
STAD
TCGA
PARTPTQE
DEG_SCF_FBW7_2
0.6218
p.R463W
TCGA-AX-A2HC
UCEC
TCGA
PARTPTQE
DEG_SCF_FBW7_2
0.7523
p.G455R
TCGA-BR-6802
STAD
TCGA
PARTPTQE
DEG_SCF_FBW7_2
0.6111
p.R463G
TCGA-CQ-7071
HNSC
TCGA
PARTPTQE
DEG_SCF_FBW7_2
0.6457
p.E451D
TCGA-EO-A3AS
UCEC
TCGA
PARTPTQE
DEG_SCF_FBW7_2
0.0556
p.A460S
DO219589
BRCA
ICGC
PARTPTQE
DEG_SCF_FBW7_2
0.3056
p.A453T
DO233869
GACA
ICGC
PARTPTQE
DEG_SCF_FBW7_2
0.1111
p.K461N
DO228952
LICA
ICGC
PARTPTQE
DEG_SCF_FBW7_2
0.6918
p.R451L
DO228985
LICA
ICGC
PARTPTQE
DEG_SCF_FBW7_2
0.0556
p.R451L
DO229022
LICA
ICGC
PARTPTQE
DEG_SCF_FBW7_2
0.0556
p.A465V
DO28014
OV
ICGC
PARTPTQE
DEG_SCF_FBW7_2
0.6936
p.R451H
DO41871
UCEC
ICGC
PARTPTQE
DEG_SCF_FBW7_2
0.0556
p.P465H
SIDM00789
Colorectal Carcinoma
GDSC
PARTPTQE
DEG_SCF_FBW7_2
0.7694
p.P465H
HCT-15
large_intestine
COSMIC
PARTPTQE
DEG_SCF_FBW7_2
0.7694
p.A462T
SIDM01560
Rhabdomyosarcoma
GDSC
PARTPTQE
DEG_SCF_FBW7_2
0.6028
p.R469W
ACH-000546
Head and Neck Cancer
CCLE
PARTPTQE
DEG_SCF_FBW7_2
0.3056
p.R469W
ACH-000980
Lung Cancer
CCLE
PARTPTQE
DEG_SCF_FBW7_2
0.3056
p.R469W
NCI-H1155
lung
COSMIC
PARTPTQE
DEG_SCF_FBW7_2
0.3056
p.R469W
HSC-4
upper_aerodigestive_tract
COSMIC
PARTPTQE
DEG_SCF_FBW7_2
0.3056
p.P456H
HCT-15
large_intestine
COSMIC
PARTPTQE
DEG_SCF_FBW7_2
0.1944
Drug responses associated with PNPLA6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PARTPTQE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IY17
Patatin-like phospholipase domain-containing protein 6
DEG_SCF_FBW7_2
461:468
PARTPTQE
FBXW7
0.9438
More...