DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PASTPMSS
Uniprot ID:
Q8N4L8
Source protein:
Coiled-coil domain-containing protein 24
Source gene:
CCDC24
Class:
DEG_SCF_FBW7_1
Location:
293:300
E3 ligase:
FBXW7
DEGRON score:
0.8648
ASA_SCORE:
85.3625
COIL:
0.9399
CONS_SCORE:
0.301
DSS_SCORE:
0.7762
HELIX:
0.0323
FCONS_SCORE:
0.9145
RIG_SCORE:
0.5695
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G292V
TCGA-GN-A265
SKCM
TCGA
PASTPMSS
DEG_SCF_FBW7_1
0.3056
p.G292V
DO37491
SKCM
ICGC
PASTPMSS
DEG_SCF_FBW7_1
0.3056
p.A305V
DO229013
COCA
ICGC
PASTPMSS
DEG_SCF_FBW7_1
0.1944
p.A305V
DO229016
COCA
ICGC
PASTPMSS
DEG_SCF_FBW7_1
0.1944
p.A305V
DO229003
COCA
ICGC
PASTPMSS
DEG_SCF_FBW7_1
0.1944
p.A305V
DO229480
LAML
ICGC
PASTPMSS
DEG_SCF_FBW7_1
0.1944
p.A305V
DO229489
LAML
ICGC
PASTPMSS
DEG_SCF_FBW7_1
0.1944
p.A305V
DO230522
LUSC
ICGC
PASTPMSS
DEG_SCF_FBW7_1
0.1944
p.A305V
DO230539
LUSC
ICGC
PASTPMSS
DEG_SCF_FBW7_1
0.1944
p.R290S
SIDM01117
Small Cell Lung Carcinoma
GDSC
PASTPMSS
DEG_SCF_FBW7_1
0.25
p.R290S
SIDM00690
Head and Neck Carcinoma
GDSC
PASTPMSS
DEG_SCF_FBW7_1
0.25
p.R290S
SIDM01147
Gastric Carcinoma
GDSC
PASTPMSS
DEG_SCF_FBW7_1
0.25
p.R290S
SIDM00793
Burkitt's Lymphoma
GDSC
PASTPMSS
DEG_SCF_FBW7_1
0.25
p.R290S
SIDM01752
Pancreatic Carcinoma
GDSC
PASTPMSS
DEG_SCF_FBW7_1
0.25
p.R290S
SIDM01525
Acute Myeloid Leukemia
GDSC
PASTPMSS
DEG_SCF_FBW7_1
0.25
p.A305T
SIDM00953
Small Cell Lung Carcinoma
GDSC
PASTPMSS
DEG_SCF_FBW7_1
0.1944
p.A305T
SIDM01322
Oral Cavity Carcinoma
GDSC
PASTPMSS
DEG_SCF_FBW7_1
0.1944
Drug responses associated with CCDC24 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PASTPMSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N4L8
Coiled-coil domain-containing protein 24
DEG_SCF_FBW7_1
293:300
PASTPMSS
FBXW7
0.8648
More...