DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PATPAKS
Uniprot ID:
P0C7A2
Source protein:
Protein FAM153B
Source gene:
FAM153B
Class:
DEG_SCF_FBW7_1
Location:
282:288
E3 ligase:
FBXW7
DEGRON score:
0.981
ASA_SCORE:
77.4857
COIL:
0.8846
CONS_SCORE:
1
DSS_SCORE:
0.6951
HELIX:
0.0701
FCONS_SCORE:
1.0476
RIG_SCORE:
0.6823
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P285L
TCGA-A2-A1G0
BRCA
TCGA
PATPAKS
DEG_SCF_FBW7_1
0.7582
p.E278K
TCGA-06-6699
GBM
TCGA
PATPAKS
DEG_SCF_FBW7_1
0.2222
p.P292S
TCGA-GN-A8LK
SKCM
TCGA
PATPAKS
DEG_SCF_FBW7_1
0.2222
p.V276E
TCGA-43-8118
LUSC
TCGA
PATPAKS
DEG_SCF_FBW7_1
0.1667
p.T274N
TCGA-AA-3715
COAD
TCGA
PATPAKS
DEG_SCF_FBW7_1
0.1111
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Drug responses associated with FAM153B mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of PATPAKS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P0C7A2
Protein FAM153B
DEG_SCF_FBW7_1
282:288
PATPAKS
FBXW7
0.981
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