DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PATPKDE
Uniprot ID:
Q9UPQ9
Source protein:
Trinucleotide repeat-containing gene 6B protein
Source gene:
TNRC6B
Class:
DEG_SCF_FBW7_2
Location:
864:870
E3 ligase:
FBXW7
DEGRON score:
0.9664
ASA_SCORE:
100
COIL:
0.916
CONS_SCORE:
0.3083
DSS_SCORE:
0.8096
HELIX:
0.0731
FCONS_SCORE:
0.6804
RIG_SCORE:
0.5359
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A865V
TCGA-A5-A0G2
UCEC
TCGA
PATPKDE
DEG_SCF_FBW7_2
0.5825
p.A865V
DO41235
UCEC
ICGC
PATPKDE
DEG_SCF_FBW7_2
0.5825
p.G861W
TCGA-D3-A2JL
SKCM
TCGA
PATPKDE
DEG_SCF_FBW7_2
0.25
p.G861W
TCGA-ER-A19F
SKCM
TCGA
PATPKDE
DEG_SCF_FBW7_2
0.25
p.G861W
TCGA-FE-A237
THCA
TCGA
PATPKDE
DEG_SCF_FBW7_2
0.25
p.G861W
DO37679
SKCM
ICGC
PATPKDE
DEG_SCF_FBW7_2
0.25
p.G861W
DO47278
SKCM
ICGC
PATPKDE
DEG_SCF_FBW7_2
0.25
p.G861W
DO40363
THCA
ICGC
PATPKDE
DEG_SCF_FBW7_2
0.25
p.G857V
DO229027
LICA
ICGC
PATPKDE
DEG_SCF_FBW7_2
0.1389
p.P862L
DO222402
MELA
ICGC
PATPKDE
DEG_SCF_FBW7_2
0.2778
p.E870D
SIDM00845
Burkitt's Lymphoma
GDSC
PATPKDE
DEG_SCF_FBW7_2
0.6758
p.E870D
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
PATPKDE
DEG_SCF_FBW7_2
0.6758
p.E870A
SIDM01140
Ovarian Carcinoma
GDSC
PATPKDE
DEG_SCF_FBW7_2
0.7701
p.P862S
ACH-000928
Endometrial/Uterine Cancer
CCLE
PATPKDE
DEG_SCF_FBW7_2
0.2778
p.T859A
ACH-001529
Endometrial/Uterine Cancer
CCLE
PATPKDE
DEG_SCF_FBW7_2
0.1944
Drug responses associated with TNRC6B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PATPKDE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPQ9
Trinucleotide repeat-containing gene 6B protein
DEG_SCF_FBW7_2
864:870
PATPKDE
FBXW7
0.9664
More...