DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PATPKTE
Uniprot ID:
P12036
Source protein:
Neurofilament heavy polypeptide
Source gene:
NEFH
Class:
DEG_SCF_FBW7_2
Location:
854:860
E3 ligase:
FBXW7
DEGRON score:
0.9515
ASA_SCORE:
109.4143
COIL:
0.9576
CONS_SCORE:
0.7612
DSS_SCORE:
0.665
HELIX:
0.0303
FCONS_SCORE:
1.0126
RIG_SCORE:
0.5722
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D858N
TCGA-FW-A3R5
SKCM
TCGA
PATPKTE
DEG_SCF_FBW7_2
0.6932
p.D858N
DO37406
SKCM
ICGC
PATPKTE
DEG_SCF_FBW7_2
0.6932
p.E868K
TCGA-Z2-A8RT
SKCM
TCGA
PATPKTE
DEG_SCF_FBW7_2
0.1111
p.E868K
DO51301
SKCM
ICGC
PATPKTE
DEG_SCF_FBW7_2
0.1111
p.K867N
SIDM00493
Other Solid Cancers
GDSC
PATPKTE
DEG_SCF_FBW7_2
0.25
p.E855D
ACH-001232
Brain Cancer
CCLE
PATPKTE
DEG_SCF_FBW7_2
0.6758
Drug responses associated with NEFH mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PATPKTE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P12036
Neurofilament heavy polypeptide
DEG_SCF_FBW7_2
854:860
PATPKTE
FBXW7
0.9515
More...