DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PATPNGT
Uniprot ID:
Q53GS7
Source protein:
mRNA export factor GLE1
Source gene:
GLE1
Class:
DEG_SCF_FBW7_1
Location:
100:106
E3 ligase:
FBXW7
DEGRON score:
0.9978
ASA_SCORE:
82.3286
COIL:
0.9267
CONS_SCORE:
0.3024
DSS_SCORE:
0.7171
HELIX:
0.0313
FCONS_SCORE:
1.0632
RIG_SCORE:
0.5277
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S96F
TCGA-EB-A3Y7
SKCM
TCGA
PATPNGT
DEG_SCF_FBW7_1
0.6667
p.S96F
DO37499
SKCM
ICGC
PATPNGT
DEG_SCF_FBW7_1
0.6667
p.S92G
TCGA-OR-A5K5
ACC
TCGA
PATPNGT
DEG_SCF_FBW7_1
0.5556
p.M99I
DO225195
BRCA
ICGC
PATPNGT
DEG_SCF_FBW7_1
0.75
p.E108G
DO44974
LIHC
ICGC
PATPNGT
DEG_SCF_FBW7_1
0.2778
p.Q101H
DO26423
LUSC
ICGC
PATPNGT
DEG_SCF_FBW7_1
0.7582
p.Q101K
DO229227
THCA
ICGC
PATPNGT
DEG_SCF_FBW7_1
0.6944
p.H114N
DO229221
THCA
ICGC
PATPNGT
DEG_SCF_FBW7_1
0.1111
p.P100S
SIDM01768
Melanoma
GDSC
PATPNGT
DEG_SCF_FBW7_1
0.6752
p.P100S
ACH-000899
Skin Cancer
CCLE
PATPNGT
DEG_SCF_FBW7_1
0.6752
Drug responses associated with GLE1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PATPNGT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q53GS7
mRNA export factor GLE1
DEG_SCF_FBW7_1
100:106
PATPNGT
FBXW7
0.9978
More...