DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PATPPDE
Uniprot ID:
Q93008
Source protein:
Probable ubiquitin carboxyl-terminal hydrolase FAF-X
Source gene:
USP9X
Class:
DEG_SCF_FBW7_2
Location:
44:50
E3 ligase:
FBXW7
DEGRON score:
0.9886
ASA_SCORE:
96.7429
COIL:
0.9211
CONS_SCORE:
0.314
DSS_SCORE:
0.9805
HELIX:
0.0659
FCONS_SCORE:
1.1037
RIG_SCORE:
0.4797
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P58Q
TCGA-18-3410
LUSC
TCGA
PATPPDE
DEG_SCF_FBW7_2
0.1111
p.P58Q
DO26456
LUSC
ICGC
PATPPDE
DEG_SCF_FBW7_2
0.1111
p.A56V
TCGA-DQ-5625
HNSC
TCGA
PATPPDE
DEG_SCF_FBW7_2
0.1667
p.A56V
DO15414
HNSC
ICGC
PATPPDE
DEG_SCF_FBW7_2
0.1667
p.P44T
TCGA-EE-A3AA
SKCM
TCGA
PATPPDE
DEG_SCF_FBW7_2
0.7031
p.P44T
DO37571
SKCM
ICGC
PATPPDE
DEG_SCF_FBW7_2
0.7031
p.E50D
DO229029
LICA
ICGC
PATPPDE
DEG_SCF_FBW7_2
0.6758
p.P44L
DO33208
PACA
ICGC
PATPPDE
DEG_SCF_FBW7_2
0.6471
p.Q51E
SIDM01624
Bladder Carcinoma
GDSC
PATPPDE
DEG_SCF_FBW7_2
0.3056
p.Q51E
ACH-000026
Bladder Cancer
CCLE
PATPPDE
DEG_SCF_FBW7_2
0.3056
Drug responses associated with USP9X mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PATPPDE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q93008
Probable ubiquitin carboxyl-terminal hydrolase FAF-X
DEG_SCF_FBW7_2
44:50
PATPPDE
FBXW7
0.9886
More...