DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PATPPNT
Uniprot ID:
Q92870
Source protein:
Amyloid beta precursor protein binding family B member 2
Source gene:
APBB2
Class:
DEG_SCF_FBW7_1
Location:
32:38
E3 ligase:
FBXW7
DEGRON score:
0.9854
ASA_SCORE:
83.5143
COIL:
0.9294
CONS_SCORE:
0.4149
DSS_SCORE:
0.687
HELIX:
0.0409
FCONS_SCORE:
0.9836
RIG_SCORE:
0.6516
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N28D
TCGA-A5-A0G2
UCEC
TCGA
PATPPNT
DEG_SCF_FBW7_1
0.2222
p.N28D
DO41235
UCEC
ICGC
PATPPNT
DEG_SCF_FBW7_1
0.2222
p.P36S
TCGA-EB-A4XL
SKCM
TCGA
PATPPNT
DEG_SCF_FBW7_1
0.5641
p.P36S
DO47401
SKCM
ICGC
PATPPNT
DEG_SCF_FBW7_1
0.5641
p.P36T
TCGA-FU-A23L
CESC
TCGA
PATPPNT
DEG_SCF_FBW7_1
0.5919
p.P36T
DO6278
CESC
ICGC
PATPPNT
DEG_SCF_FBW7_1
0.5919
p.V44L
DO228934
LICA
ICGC
PATPPNT
DEG_SCF_FBW7_1
0.1667
p.L48M
DO229041
LICA
ICGC
PATPPNT
DEG_SCF_FBW7_1
0.0556
p.G48A
DO50301
SKCM
ICGC
PATPPNT
DEG_SCF_FBW7_1
0.0556
p.L23F
DO51286
SKCM
ICGC
PATPPNT
DEG_SCF_FBW7_1
0.0833
p.V44M
DO38743
STAD
ICGC
PATPPNT
DEG_SCF_FBW7_1
0.1667
p.N30S
SIDM01580
Melanoma
GDSC
PATPPNT
DEG_SCF_FBW7_1
0.2778
p.N30S
ACH-000240
Non-Cancerous
CCLE
PATPPNT
DEG_SCF_FBW7_1
0.2778
Drug responses associated with APBB2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PATPPNT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92870
Amyloid beta precursor protein binding family B member 2
DEG_SCF_FBW7_1
32:38
PATPPNT
FBXW7
0.9854
More...