DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PATPRFS
Uniprot ID:
Q71F56
Source protein:
Mediator of RNA polymerase II transcription subunit 13-like
Source gene:
MED13L
Class:
DEG_SCF_FBW7_1
Location:
1041:1047
E3 ligase:
FBXW7
DEGRON score:
0.9792
ASA_SCORE:
96.4857
COIL:
0.946
CONS_SCORE:
0.3247
DSS_SCORE:
0.6985
HELIX:
0.021
FCONS_SCORE:
0.9929
RIG_SCORE:
0.6289
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1045L
TCGA-85-A4CL
LUSC
TCGA
PATPRFS
DEG_SCF_FBW7_1
0.7316
p.R1045L
DO45454
LUSC
ICGC
PATPRFS
DEG_SCF_FBW7_1
0.7316
p.A1042T
TCGA-AX-A3FS
UCEC
TCGA
PATPRFS
DEG_SCF_FBW7_1
0.6028
p.A1042T
TCGA-PG-A917
UCEC
TCGA
PATPRFS
DEG_SCF_FBW7_1
0.6028
p.A1042T
DO40879
UCEC
ICGC
PATPRFS
DEG_SCF_FBW7_1
0.6028
p.A1042T
DO52424
UCEC
ICGC
PATPRFS
DEG_SCF_FBW7_1
0.6028
p.P1057Q
TCGA-D3-A2J6
SKCM
TCGA
PATPRFS
DEG_SCF_FBW7_1
0.0556
p.P1057Q
DO37901
SKCM
ICGC
PATPRFS
DEG_SCF_FBW7_1
0.0556
p.R1045P
DO221456
AML
ICGC
PATPRFS
DEG_SCF_FBW7_1
0.6401
p.R1045H
DO233634
GACA
ICGC
PATPRFS
DEG_SCF_FBW7_1
0.7133
Drug responses associated with MED13L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PATPRFS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q71F56
Mediator of RNA polymerase II transcription subunit 13-like
DEG_SCF_FBW7_1
1041:1047
PATPRFS
FBXW7
0.9792
More...