DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PATPRPE
Uniprot ID:
Q99742
Source protein:
Neuronal PAS domain-containing protein 1
Source gene:
NPAS1
Class:
DEG_SCF_FBW7_2
Location:
487:493
E3 ligase:
FBXW7
DEGRON score:
0.8156
ASA_SCORE:
90.3286
COIL:
0.9283
CONS_SCORE:
0.3531
DSS_SCORE:
0.735
HELIX:
0.0267
FCONS_SCORE:
0.9934
RIG_SCORE:
0.6095
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P487Q
TCGA-BF-A1Q0
SKCM
TCGA
PATPRPE
DEG_SCF_FBW7_2
0.7035
p.R499W
SIDM01629
Melanoma
GDSC
PATPRPE
DEG_SCF_FBW7_2
0.1667
p.R499W
ACH-000404
Skin Cancer
CCLE
PATPRPE
DEG_SCF_FBW7_2
0.1667
p.I498T
ACH-000404
Skin Cancer
CCLE
PATPRPE
DEG_SCF_FBW7_2
0.1944
p.E493K
ACH-002256
Leukemia
CCLE
PATPRPE
DEG_SCF_FBW7_2
0.7022
p.E493K
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
PATPRPE
DEG_SCF_FBW7_2
0.7022
Drug responses associated with NPAS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PATPRPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q99742
Neuronal PAS domain-containing protein 1
DEG_SCF_FBW7_2
487:493
PATPRPE
FBXW7
0.8156
More...