DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PATPRPS
Uniprot ID:
Q6NSI3
Source protein:
Protein FAM53A
Source gene:
FAM53A
Class:
DEG_SCF_FBW7_1
Location:
182:188
E3 ligase:
FBXW7
DEGRON score:
0.9898
ASA_SCORE:
71.9143
COIL:
0.9183
CONS_SCORE:
0.7484
DSS_SCORE:
0.6257
HELIX:
0.0311
FCONS_SCORE:
1.0569
RIG_SCORE:
0.5988
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G193C
TCGA-DD-AACE
LIHC
TCGA
PATPRPS
DEG_SCF_FBW7_1
0.1944
p.G193C
DO52200
LIHC
ICGC
PATPRPS
DEG_SCF_FBW7_1
0.1944
p.S181L
DO229010
COCA
ICGC
PATPRPS
DEG_SCF_FBW7_1
0.3056
p.S189F
DO220885
MELA
ICGC
PATPRPS
DEG_SCF_FBW7_1
0.3056
p.T180P
DO35672
PBCA
ICGC
PATPRPS
DEG_SCF_FBW7_1
0.2778
p.V195M
DO38376
STAD
ICGC
PATPRPS
DEG_SCF_FBW7_1
0.1389
p.T184M
SIDM02026
Colorectal Carcinoma
GDSC
PATPRPS
DEG_SCF_FBW7_1
0.7423
p.S197I
SIDM00709
Non-Small Cell Lung Carcinoma
GDSC
PATPRPS
DEG_SCF_FBW7_1
0.0833
p.T177A
ACH-000982
Colon/Colorectal Cancer
CCLE
PATPRPS
DEG_SCF_FBW7_1
0.1944
Drug responses associated with FAM53A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PATPRPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6NSI3
Protein FAM53A
DEG_SCF_FBW7_1
182:188
PATPRPS
FBXW7
0.9898
More...