DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PATPTAS
Uniprot ID:
Q12888
Source protein:
TP53-binding protein 1
Source gene:
TP53BP1
Class:
DEG_SCF_FBW7_1
Location:
1636:1642
E3 ligase:
FBXW7
DEGRON score:
0.9715
ASA_SCORE:
94.9429
COIL:
0.9566
CONS_SCORE:
0.3219
DSS_SCORE:
0.6949
HELIX:
0.0234
FCONS_SCORE:
0.6927
RIG_SCORE:
0.557
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1641S
TCGA-4Z-AA7O
BLCA
TCGA
PATPTAS
DEG_SCF_FBW7_1
0.6752
p.A1646T
TCGA-AP-A059
UCEC
TCGA
PATPTAS
DEG_SCF_FBW7_1
0.6667
p.R1632L
TCGA-D3-A2JC
SKCM
TCGA
PATPTAS
DEG_SCF_FBW7_1
0.2222
p.P1636S
DO51865
BLCA
ICGC
PATPTAS
DEG_SCF_FBW7_1
0.6752
p.R1627L
DO47578
SKCM
ICGC
PATPTAS
DEG_SCF_FBW7_1
0.0833
p.A1641T
DO41361
UCEC
ICGC
PATPTAS
DEG_SCF_FBW7_1
0.6028
p.T1652I
SIDM01283
Esophageal Carcinoma
GDSC
PATPTAS
DEG_SCF_FBW7_1
0.1667
p.S1647A
SIDM00845
Burkitt's Lymphoma
GDSC
PATPTAS
DEG_SCF_FBW7_1
0.6389
p.S1640F
SIDM00107
Melanoma
GDSC
PATPTAS
DEG_SCF_FBW7_1
0.7982
p.S1640F
UACC-62
skin
COSMIC
PATPTAS
DEG_SCF_FBW7_1
0.7982
p.V1638I
SIDM00375
Head and Neck Carcinoma
GDSC
PATPTAS
DEG_SCF_FBW7_1
0.7076
p.V1638I
SKN-3
upper_aerodigestive_tract
COSMIC
PATPTAS
DEG_SCF_FBW7_1
0.7076
p.V1649A
ACH-000948
Gastric Cancer
CCLE
PATPTAS
DEG_SCF_FBW7_1
0.1389
p.V1649A
23132-87
stomach
COSMIC
PATPTAS
DEG_SCF_FBW7_1
0.1389
p.S1635F
UACC-62
skin
COSMIC
PATPTAS
DEG_SCF_FBW7_1
0.75
p.V1633I
SKN-3
upper_aerodigestive_tract
COSMIC
PATPTAS
DEG_SCF_FBW7_1
0.25
Drug responses associated with TP53BP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PATPTAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12888
TP53-binding protein 1
DEG_SCF_FBW7_1
1636:1642
PATPTAS
FBXW7
0.9715
More...