DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PCLTPSPE
Uniprot ID:
Q99466
Source protein:
Neurogenic locus notch homolog protein 4
Source gene:
NOTCH4
Class:
DEG_SCF_FBW7_2
Location:
1970:1977
E3 ligase:
FBXW7
DEGRON score:
0.999
ASA_SCORE:
76.7875
COIL:
0.8763
CONS_SCORE:
0.4951
DSS_SCORE:
0.5986
HELIX:
0.0679
FCONS_SCORE:
1.2044
RIG_SCORE:
0.6322
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1974R
TCGA-NK-A5CT
LUSC
TCGA
PCLTPSPE
DEG_SCF_FBW7_2
0.7512
p.P1974R
DO219209
LUSC
ICGC
PCLTPSPE
DEG_SCF_FBW7_2
0.7512
p.E1977K
TCGA-UY-A9PH
BLCA
TCGA
PCLTPSPE
DEG_SCF_FBW7_2
0.7022
p.E1977K
DO223594
BLCA
ICGC
PCLTPSPE
DEG_SCF_FBW7_2
0.7022
p.E1977K
SIDM00312
Plasma Cell Myeloma
GDSC
PCLTPSPE
DEG_SCF_FBW7_2
0.7022
p.E1977K
ACH-000183
Myeloma
CCLE
PCLTPSPE
DEG_SCF_FBW7_2
0.7022
p.E1977K
ACH-001395
Breast Cancer
CCLE
PCLTPSPE
DEG_SCF_FBW7_2
0.7022
p.E1977K
L-363
haematopoietic_and_lymphoid_tissue
COSMIC
PCLTPSPE
DEG_SCF_FBW7_2
0.7022
p.P1970S
TCGA-EE-A29L
SKCM
TCGA
PCLTPSPE
DEG_SCF_FBW7_2
0.6752
p.P1970S
DO222599
MELA
ICGC
PCLTPSPE
DEG_SCF_FBW7_2
0.6752
p.P1970S
DO37835
SKCM
ICGC
PCLTPSPE
DEG_SCF_FBW7_2
0.6752
p.E1977Q
TCGA-55-7995
LUAD
TCGA
PCLTPSPE
DEG_SCF_FBW7_2
0.6744
p.E1977Q
TCGA-DG-A2KK
CESC
TCGA
PCLTPSPE
DEG_SCF_FBW7_2
0.6744
p.E1977Q
DO225215
BRCA
ICGC
PCLTPSPE
DEG_SCF_FBW7_2
0.6744
p.E1977Q
DO227836
BRCA
ICGC
PCLTPSPE
DEG_SCF_FBW7_2
0.6744
p.E1977Q
DO51595
CESC
ICGC
PCLTPSPE
DEG_SCF_FBW7_2
0.6744
p.E1977Q
DO45323
LUAD
ICGC
PCLTPSPE
DEG_SCF_FBW7_2
0.6744
p.S1975T
DO234398
ESAD
ICGC
PCLTPSPE
DEG_SCF_FBW7_2
0.6005
p.C1971F
TCGA-22-4593
LUSC
TCGA
PCLTPSPE
DEG_SCF_FBW7_2
0.5996
p.C1971F
DO27018
LUSC
ICGC
PCLTPSPE
DEG_SCF_FBW7_2
0.5996
p.P1976S
TCGA-GN-A8LK
SKCM
TCGA
PCLTPSPE
DEG_SCF_FBW7_2
0.5641
p.P1976S
DO51259
SKCM
ICGC
PCLTPSPE
DEG_SCF_FBW7_2
0.5641
p.R1978L
TCGA-AP-A05A
UCEC
TCGA
PCLTPSPE
DEG_SCF_FBW7_2
0.3056
p.R1978L
DO218553
BRCA
ICGC
PCLTPSPE
DEG_SCF_FBW7_2
0.3056
p.R1978L
DO41530
UCEC
ICGC
PCLTPSPE
DEG_SCF_FBW7_2
0.3056
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Drug responses associated with NOTCH4 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of PCLTPSPE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q99466
Neurogenic locus notch homolog protein 4
DEG_SCF_FBW7_2
1970:1977
PCLTPSPE
FBXW7
0.999
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