DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PCTPAST
Uniprot ID:
Q5THR3
Source protein:
EF-hand calcium-binding domain-containing protein 6
Source gene:
EFCAB6
Class:
DEG_SCF_FBW7_1
Location:
1292:1298
E3 ligase:
FBXW7
DEGRON score:
0.9748
ASA_SCORE:
75.5286
COIL:
0.9194
CONS_SCORE:
0.2977
DSS_SCORE:
0.6638
HELIX:
0.025
FCONS_SCORE:
0.962
RIG_SCORE:
0.6066
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1293R
DO229041
LICA
ICGC
PCTPAST
DEG_SCF_FBW7_1
0.7427
p.Y1294C
DO52438
COCA
ICGC
PCTPAST
DEG_SCF_FBW7_1
0.7087
p.A1296S
TCGA-A5-A0G2
UCEC
TCGA
PCTPAST
DEG_SCF_FBW7_1
0.6477
p.P1292L
TCGA-FW-A3R5
SKCM
TCGA
PCTPAST
DEG_SCF_FBW7_1
0.6471
p.A1296V
SIDM01617
Endometrial Carcinoma
GDSC
PCTPAST
DEG_SCF_FBW7_1
0.5825
p.A1296V
ACH-000994
Endometrial/Uterine Cancer
CCLE
PCTPAST
DEG_SCF_FBW7_1
0.5825
p.Q1289H
TCGA-EE-A20F
SKCM
TCGA
PCTPAST
DEG_SCF_FBW7_1
0.25
p.R1289C
DO8842
COAD
ICGC
PCTPAST
DEG_SCF_FBW7_1
0.25
p.R1289S
DO26553
LUSC
ICGC
PCTPAST
DEG_SCF_FBW7_1
0.25
p.R1289H
DO47469
SKCM
ICGC
PCTPAST
DEG_SCF_FBW7_1
0.25
p.R1289H
DO38551
STAD
ICGC
PCTPAST
DEG_SCF_FBW7_1
0.25
p.R1289H
DB
haematopoietic_and_lymphoid_tissue
COSMIC
PCTPAST
DEG_SCF_FBW7_1
0.25
p.S1288L
TCGA-EY-A1GI
UCEC
TCGA
PCTPAST
DEG_SCF_FBW7_1
0.2222
p.S1288L
SIDM00469
Pancreatic Carcinoma
GDSC
PCTPAST
DEG_SCF_FBW7_1
0.2222
p.S1288L
ACH-000320
Pancreatic Cancer
CCLE
PCTPAST
DEG_SCF_FBW7_1
0.2222
p.S1288L
ACH-002066
Sarcoma
CCLE
PCTPAST
DEG_SCF_FBW7_1
0.2222
p.S1288L
PSN1
pancreas
COSMIC
PCTPAST
DEG_SCF_FBW7_1
0.2222
p.R1288Q
DO51214
BRCA
ICGC
PCTPAST
DEG_SCF_FBW7_1
0.2222
p.R1288Q
DO222427
BTCA
ICGC
PCTPAST
DEG_SCF_FBW7_1
0.2222
p.R1288W
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
PCTPAST
DEG_SCF_FBW7_1
0.2222
p.R1288W
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
PCTPAST
DEG_SCF_FBW7_1
0.2222
p.V1304I
DO9964
COAD
ICGC
PCTPAST
DEG_SCF_FBW7_1
0.1667
p.V1304I
DO9530
COAD
ICGC
PCTPAST
DEG_SCF_FBW7_1
0.1667
p.A1305T
DO41235
UCEC
ICGC
PCTPAST
DEG_SCF_FBW7_1
0.1389
p.R1285K
COLO-792
skin
COSMIC
PCTPAST
DEG_SCF_FBW7_1
0.1389
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Drug responses associated with EFCAB6 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of PCTPAST
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5THR3
EF-hand calcium-binding domain-containing protein 6
DEG_SCF_FBW7_1
1292:1298
PCTPAST
FBXW7
0.9748
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