DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PCVTPVST
Uniprot ID:
Q08999
Source protein:
Retinoblastoma-like protein 2
Source gene:
RBL2
Class:
DEG_SCF_FBW7_1
Location:
414:421
E3 ligase:
FBXW7
DEGRON score:
0.9994
ASA_SCORE:
70.5375
COIL:
0.8454
CONS_SCORE:
0.4674
DSS_SCORE:
0.3964
HELIX:
0.0745
FCONS_SCORE:
1.1184
RIG_SCORE:
0.7372
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R428C
TCGA-13-1477
OV
TCGA
PCVTPVST
DEG_SCF_FBW7_1
0.1389
p.R428C
TCGA-KO-8408
KICH
TCGA
PCVTPVST
DEG_SCF_FBW7_1
0.1389
p.H430Y
TCGA-85-A512
LUSC
TCGA
PCVTPVST
DEG_SCF_FBW7_1
0.0833
p.L429I
TCGA-A5-A0G2
UCEC
TCGA
PCVTPVST
DEG_SCF_FBW7_1
0.1111
p.Y408C
TCGA-AA-3715
COAD
TCGA
PCVTPVST
DEG_SCF_FBW7_1
0.1667
p.S420F
TCGA-DK-AA6S
BLCA
TCGA
PCVTPVST
DEG_SCF_FBW7_1
0.6871
p.R428S
TCGA-KQ-A41N
BLCA
TCGA
PCVTPVST
DEG_SCF_FBW7_1
0.1389
p.C419G
DO234365
ESAD
ICGC
PCVTPVST
DEG_SCF_FBW7_1
0.76
p.E405D
DO228948
LICA
ICGC
PCVTPVST
DEG_SCF_FBW7_1
0.0833
p.E405D
DO229045
LICA
ICGC
PCVTPVST
DEG_SCF_FBW7_1
0.0833
p.R425H
DO228972
LICA
ICGC
PCVTPVST
DEG_SCF_FBW7_1
0.2222
p.R425C
DO231110
LUSC
ICGC
PCVTPVST
DEG_SCF_FBW7_1
0.2222
p.T423M
SIDM00220
Ovarian Carcinoma
GDSC
PCVTPVST
DEG_SCF_FBW7_1
0.2778
p.T423M
ACH-000962
Ovarian Cancer
CCLE
PCVTPVST
DEG_SCF_FBW7_1
0.2778
p.T423M
ACH-001145
Ovarian Cancer
CCLE
PCVTPVST
DEG_SCF_FBW7_1
0.2778
p.T423M
OC-314
ovary
COSMIC
PCVTPVST
DEG_SCF_FBW7_1
0.2778
Drug responses associated with RBL2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PCVTPVST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q08999
Retinoblastoma-like protein 2
DEG_SCF_FBW7_1
414:421
PCVTPVST
FBXW7
0.9994
More...