DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PDCTPVNS
Uniprot ID:
Q8N4X5
Source protein:
Actin filament-associated protein 1-like 2
Source gene:
AFAP1L2
Class:
DEG_SCF_FBW7_1
Location:
779:786
E3 ligase:
FBXW7
DEGRON score:
0.9998
ASA_SCORE:
63.2625
COIL:
0.7176
CONS_SCORE:
0.4577
DSS_SCORE:
0.5185
HELIX:
0.1458
FCONS_SCORE:
1.0943
RIG_SCORE:
0.7244
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R783C
DO19380
KIRC
ICGC
PDCTPVNS
DEG_SCF_FBW7_1
0.8301
p.T788I
SIDM00688
B-Cell Non-Hodgkin's Lymphoma
GDSC
PDCTPVNS
DEG_SCF_FBW7_1
0.7222
p.T788I
ACH-002253
Lymphoma
CCLE
PDCTPVNS
DEG_SCF_FBW7_1
0.7222
p.T788I
JSC-1
haematopoietic_and_lymphoid_tissue
COSMIC
PDCTPVNS
DEG_SCF_FBW7_1
0.7222
p.T784I
JSC-1
haematopoietic_and_lymphoid_tissue
COSMIC
PDCTPVNS
DEG_SCF_FBW7_1
0.7078
p.E774V
DO44045
BLCA
ICGC
PDCTPVNS
DEG_SCF_FBW7_1
0.6389
p.S796L
TCGA-EE-A2GP
SKCM
TCGA
PDCTPVNS
DEG_SCF_FBW7_1
0.5
p.S796L
DO37422
SKCM
ICGC
PDCTPVNS
DEG_SCF_FBW7_1
0.5
p.S796L
ACH-001200
Rhabdoid
CCLE
PDCTPVNS
DEG_SCF_FBW7_1
0.5
p.S777F
TCGA-44-5643
LUAD
TCGA
PDCTPVNS
DEG_SCF_FBW7_1
0.2778
p.R777W
DO233652
GACA
ICGC
PDCTPVNS
DEG_SCF_FBW7_1
0.2778
p.T789A
SIDM01588
Endometrial Carcinoma
GDSC
PDCTPVNS
DEG_SCF_FBW7_1
0.25
p.T789A
ACH-000993
Endometrial/Uterine Cancer
CCLE
PDCTPVNS
DEG_SCF_FBW7_1
0.25
p.N792K
DO228952
LICA
ICGC
PDCTPVNS
DEG_SCF_FBW7_1
0.1667
p.A772V
SIDM00930
Osteosarcoma
GDSC
PDCTPVNS
DEG_SCF_FBW7_1
0.1389
p.A772V
ACH-001715
Bone Cancer
CCLE
PDCTPVNS
DEG_SCF_FBW7_1
0.1389
p.D795E
DO229009
LICA
ICGC
PDCTPVNS
DEG_SCF_FBW7_1
0.0833
p.R769H
SIDM01018
Hodgkin's Lymphoma
GDSC
PDCTPVNS
DEG_SCF_FBW7_1
0.0556
p.R769H
KM-H2
haematopoietic_and_lymphoid_tissue
COSMIC
PDCTPVNS
DEG_SCF_FBW7_1
0.0556
p.R769S
CAL-148
breast
COSMIC
PDCTPVNS
DEG_SCF_FBW7_1
0.0556
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Drug responses associated with AFAP1L2 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of PDCTPVNS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N4X5
Actin filament-associated protein 1-like 2
DEG_SCF_FBW7_1
779:786
PDCTPVNS
FBXW7
0.9998
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