DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PEDTPLGT
Uniprot ID:
Q9Y5G6
Source protein:
Protocadherin gamma-A7
Source gene:
PCDHGA7
Class:
DEG_SCF_FBW7_1
Location:
357:364
E3 ligase:
FBXW7
DEGRON score:
0.6039
ASA_SCORE:
58.1375
COIL:
0.8383
CONS_SCORE:
0.601
DSS_SCORE:
0.2598
HELIX:
0.0308
FCONS_SCORE:
1.0146
RIG_SCORE:
0.7675
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D359G
TCGA-06-5416
GBM
TCGA
PEDTPLGT
DEG_SCF_FBW7_1
0.6087
p.D359G
DO10880
GBM
ICGC
PEDTPLGT
DEG_SCF_FBW7_1
0.6087
p.Q372R
TCGA-17-Z045
LUAD
TCGA
PEDTPLGT
DEG_SCF_FBW7_1
0.1111
p.P361S
TCGA-18-3409
LUSC
TCGA
PEDTPLGT
DEG_SCF_FBW7_1
0.6752
p.P361S
DO26444
LUSC
ICGC
PEDTPLGT
DEG_SCF_FBW7_1
0.6752
p.I356V
TCGA-A8-A08R
BRCA
TCGA
PEDTPLGT
DEG_SCF_FBW7_1
0.3056
p.I356V
DO1255
BRCA
ICGC
PEDTPLGT
DEG_SCF_FBW7_1
0.3056
p.A367D
TCGA-AX-A06F
UCEC
TCGA
PEDTPLGT
DEG_SCF_FBW7_1
0.25
p.A367D
DO41752
UCEC
ICGC
PEDTPLGT
DEG_SCF_FBW7_1
0.25
p.S353G
TCGA-CG-4441
STAD
TCGA
PEDTPLGT
DEG_SCF_FBW7_1
0.2222
p.S353G
DO38250
STAD
ICGC
PEDTPLGT
DEG_SCF_FBW7_1
0.2222
p.P357H
TCGA-D3-A2JC
SKCM
TCGA
PEDTPLGT
DEG_SCF_FBW7_1
0.7694
p.P357H
DO47578
SKCM
ICGC
PEDTPLGT
DEG_SCF_FBW7_1
0.7694
p.P357S
TCGA-EE-A2A6
SKCM
TCGA
PEDTPLGT
DEG_SCF_FBW7_1
0.6752
p.P357S
DO37591
SKCM
ICGC
PEDTPLGT
DEG_SCF_FBW7_1
0.6752
p.P357L
TCGA-EE-A2A6
SKCM
TCGA
PEDTPLGT
DEG_SCF_FBW7_1
0.6471
p.P357L
DO37591
SKCM
ICGC
PEDTPLGT
DEG_SCF_FBW7_1
0.6471
p.D359N
TCGA-G2-A3VY
BLCA
TCGA
PEDTPLGT
DEG_SCF_FBW7_1
0.5821
p.D359N
DO590
BLCA
ICGC
PEDTPLGT
DEG_SCF_FBW7_1
0.5821
p.M349I
DO227609
COCA
ICGC
PEDTPLGT
DEG_SCF_FBW7_1
0.1111
p.T364K
DO228511
MALY
ICGC
PEDTPLGT
DEG_SCF_FBW7_1
0.7306
p.T350M
SIDM00660
Colorectal Carcinoma
GDSC
PEDTPLGT
DEG_SCF_FBW7_1
0.1389
p.T350M
SIDM00836
Colorectal Carcinoma
GDSC
PEDTPLGT
DEG_SCF_FBW7_1
0.1389
p.T350M
ACH-000820
Colon/Colorectal Cancer
CCLE
PEDTPLGT
DEG_SCF_FBW7_1
0.1389
p.T350M
ACH-000985
Colon/Colorectal Cancer
CCLE
PEDTPLGT
DEG_SCF_FBW7_1
0.1389
p.T350M
SW403
large_intestine
COSMIC
PEDTPLGT
DEG_SCF_FBW7_1
0.1389
p.T350M
LS-411N
large_intestine
COSMIC
PEDTPLGT
DEG_SCF_FBW7_1
0.1389
p.S355L
SIDM01608
Endometrial Carcinoma
GDSC
PEDTPLGT
DEG_SCF_FBW7_1
0.2778
p.S355L
ACH-000990
Endometrial/Uterine Cancer
CCLE
PEDTPLGT
DEG_SCF_FBW7_1
0.2778
p.P361A
SIDM01378
Ovarian Carcinoma
GDSC
PEDTPLGT
DEG_SCF_FBW7_1
0.7503
p.P361A
ACH-000646
Ovarian Cancer
CCLE
PEDTPLGT
DEG_SCF_FBW7_1
0.7503
p.V365F
SIDM01378
Ovarian Carcinoma
GDSC
PEDTPLGT
DEG_SCF_FBW7_1
0.3056
Drug responses associated with PCDHGA7 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PEDTPLGT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y5G6
Protocadherin gamma-A7
DEG_SCF_FBW7_1
357:364
PEDTPLGT
FBXW7
0.6039
More...