DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PEPTPSHT
Uniprot ID:
Q9P218
Source protein:
Collagen alpha-1
Source gene:
COL20A1
Class:
DEG_SCF_FBW7_1
Location:
134:141
E3 ligase:
FBXW7
DEGRON score:
0.9897
ASA_SCORE:
72.6125
COIL:
0.8543
CONS_SCORE:
0.4949
DSS_SCORE:
0.904
HELIX:
0.0343
FCONS_SCORE:
1.1587
RIG_SCORE:
0.4479
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D145Y
TCGA-44-7670
LUAD
TCGA
PEPTPSHT
DEG_SCF_FBW7_1
0.2222
p.D145Y
DO23555
LUAD
ICGC
PEPTPSHT
DEG_SCF_FBW7_1
0.2222
p.P128T
TCGA-CD-8536
STAD
TCGA
PEPTPSHT
DEG_SCF_FBW7_1
0.1667
p.P128T
DO47827
STAD
ICGC
PEPTPSHT
DEG_SCF_FBW7_1
0.1667
p.G142R
TCGA-EE-A2MS
SKCM
TCGA
PEPTPSHT
DEG_SCF_FBW7_1
0.3056
p.G142R
DO37567
SKCM
ICGC
PEPTPSHT
DEG_SCF_FBW7_1
0.3056
p.A149V
TCGA-LT-A8JT
BLCA
TCGA
PEPTPSHT
DEG_SCF_FBW7_1
0.1111
p.A149V
DO51901
BLCA
ICGC
PEPTPSHT
DEG_SCF_FBW7_1
0.1111
p.S125R
TCGA-QC-A7B5
SARC
TCGA
PEPTPSHT
DEG_SCF_FBW7_1
0.0833
p.S125R
DO220239
SARC
ICGC
PEPTPSHT
DEG_SCF_FBW7_1
0.0833
p.P134L
DO234285
ESAD
ICGC
PEPTPSHT
DEG_SCF_FBW7_1
0.6471
p.S124I
DO228985
LICA
ICGC
PEPTPSHT
DEG_SCF_FBW7_1
0.0556
p.S139Y
DO231830
LINC
ICGC
PEPTPSHT
DEG_SCF_FBW7_1
0.6009
Drug responses associated with COL20A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PEPTPSHT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P218
Collagen alpha-1
DEG_SCF_FBW7_1
134:141
PEPTPSHT
FBXW7
0.9897
More...