DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PEPTPVKT
Uniprot ID:
Q9NRL2
Source protein:
Bromodomain adjacent to zinc finger domain protein 1A
Source gene:
BAZ1A
Class:
DEG_SCF_FBW7_1
Location:
411:418
E3 ligase:
FBXW7
DEGRON score:
0.8354
ASA_SCORE:
76.6
COIL:
0.8793
CONS_SCORE:
0.3742
DSS_SCORE:
0.4866
HELIX:
0.0218
FCONS_SCORE:
0.7738
RIG_SCORE:
0.7293
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D406A
TCGA-D7-A6EY
STAD
TCGA
PEPTPVKT
DEG_SCF_FBW7_1
0.1944
p.D406A
DO50118
STAD
ICGC
PEPTPVKT
DEG_SCF_FBW7_1
0.1944
p.P411S
TCGA-EE-A29E
SKCM
TCGA
PEPTPVKT
DEG_SCF_FBW7_1
0.6752
p.P411S
DO37831
SKCM
ICGC
PEPTPVKT
DEG_SCF_FBW7_1
0.6752
p.E412K
TCGA-EY-A2OM
UCEC
TCGA
PEPTPVKT
DEG_SCF_FBW7_1
0.591
p.E412K
DO43025
UCEC
ICGC
PEPTPVKT
DEG_SCF_FBW7_1
0.591
p.P421S
TCGA-G4-6588
COAD
TCGA
PEPTPVKT
DEG_SCF_FBW7_1
0.25
p.P421S
DO10140
COAD
ICGC
PEPTPVKT
DEG_SCF_FBW7_1
0.25
p.T414K
TCGA-HU-A4H4
STAD
TCGA
PEPTPVKT
DEG_SCF_FBW7_1
0.7306
p.T414K
DO229037
LICA
ICGC
PEPTPVKT
DEG_SCF_FBW7_1
0.7306
p.T414K
DO47721
STAD
ICGC
PEPTPVKT
DEG_SCF_FBW7_1
0.7306
p.P413T
DO228985
LICA
ICGC
PEPTPVKT
DEG_SCF_FBW7_1
0.5919
p.A428G
SIDM00392
Melanoma
GDSC
PEPTPVKT
DEG_SCF_FBW7_1
0.0556
p.A428G
ACH-000810
Skin Cancer
CCLE
PEPTPVKT
DEG_SCF_FBW7_1
0.0556
p.A428G
SK-MEL-30
skin
COSMIC
PEPTPVKT
DEG_SCF_FBW7_1
0.0556
p.A428V
SIDM00660
Colorectal Carcinoma
GDSC
PEPTPVKT
DEG_SCF_FBW7_1
0.0556
p.A428V
ACH-000985
Colon/Colorectal Cancer
CCLE
PEPTPVKT
DEG_SCF_FBW7_1
0.0556
p.A428V
ACH-001786
Colon/Colorectal Cancer
CCLE
PEPTPVKT
DEG_SCF_FBW7_1
0.0556
p.A428V
LS-411N
large_intestine
COSMIC
PEPTPVKT
DEG_SCF_FBW7_1
0.0556
Drug responses associated with BAZ1A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PEPTPVKT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NRL2
Bromodomain adjacent to zinc finger domain protein 1A
DEG_SCF_FBW7_1
411:418
PEPTPVKT
FBXW7
0.8354
More...