DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PFGTPFGS
Uniprot ID:
Q9BTX1
Source protein:
Nucleoporin NDC1
Source gene:
NDC1
Class:
DEG_SCF_FBW7_1
Location:
446:453
E3 ligase:
FBXW7
DEGRON score:
0.9963
ASA_SCORE:
56.55
COIL:
0.8703
CONS_SCORE:
0.313
DSS_SCORE:
0.2929
HELIX:
0.0529
FCONS_SCORE:
1.1228
RIG_SCORE:
0.7265
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G448V
TCGA-55-8506
LUAD
TCGA
PFGTPFGS
DEG_SCF_FBW7_1
0.6421
p.G448V
DO45390
LUAD
ICGC
PFGTPFGS
DEG_SCF_FBW7_1
0.6421
p.A460S
TCGA-95-7562
LUAD
TCGA
PFGTPFGS
DEG_SCF_FBW7_1
0.1389
p.A460S
DO51196
LUAD
ICGC
PFGTPFGS
DEG_SCF_FBW7_1
0.1389
p.R458Q
TCGA-B5-A11E
UCEC
TCGA
PFGTPFGS
DEG_SCF_FBW7_1
0.1944
p.R458Q
TCGA-B5-A3FC
UCEC
TCGA
PFGTPFGS
DEG_SCF_FBW7_1
0.1944
p.R458Q
DO233115
GACA
ICGC
PFGTPFGS
DEG_SCF_FBW7_1
0.1944
p.R458Q
DO41644
UCEC
ICGC
PFGTPFGS
DEG_SCF_FBW7_1
0.1944
p.R458Q
DO41871
UCEC
ICGC
PFGTPFGS
DEG_SCF_FBW7_1
0.1944
p.G448W
TCGA-D3-A3CE
SKCM
TCGA
PFGTPFGS
DEG_SCF_FBW7_1
0.6714
p.G448W
DO37405
SKCM
ICGC
PFGTPFGS
DEG_SCF_FBW7_1
0.6714
p.L438S
DO233918
GACA
ICGC
PFGTPFGS
DEG_SCF_FBW7_1
0.1111
p.L438V
DO50836
LICA
ICGC
PFGTPFGS
DEG_SCF_FBW7_1
0.1111
p.V455E
DO31150
OV
ICGC
PFGTPFGS
DEG_SCF_FBW7_1
0.2778
p.T440A
ACH-000982
Colon/Colorectal Cancer
CCLE
PFGTPFGS
DEG_SCF_FBW7_1
0.6111
p.A460T
ACH-001509
Head and Neck Cancer
CCLE
PFGTPFGS
DEG_SCF_FBW7_1
0.1389
Drug responses associated with NDC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PFGTPFGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BTX1
Nucleoporin NDC1
DEG_SCF_FBW7_1
446:453
PFGTPFGS
FBXW7
0.9963
More...