DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PFTPSGS
Uniprot ID:
O43525
Source protein:
Potassium voltage-gated channel subfamily KQT member 3
Source gene:
KCNQ3
Class:
DEG_SCF_FBW7_1
Location:
844:850
E3 ligase:
FBXW7
DEGRON score:
0.9044
ASA_SCORE:
58.8857
COIL:
0.8721
CONS_SCORE:
0.3859
DSS_SCORE:
0.7184
HELIX:
0.0386
FCONS_SCORE:
1.0284
RIG_SCORE:
0.6582
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G836C
TCGA-22-4595
LUSC
TCGA
PFTPSGS
DEG_SCF_FBW7_1
0.1111
p.A834T
TCGA-AA-3855
COAD
TCGA
PFTPSGS
DEG_SCF_FBW7_1
0.0556
p.A834T
TCGA-D5-6928
COAD
TCGA
PFTPSGS
DEG_SCF_FBW7_1
0.0556
p.T842M
TCGA-AA-3864
COAD
TCGA
PFTPSGS
DEG_SCF_FBW7_1
0.2778
p.T842M
TCGA-CR-7399
HNSC
TCGA
PFTPSGS
DEG_SCF_FBW7_1
0.2778
p.T842M
TCGA-VQ-A8P2
STAD
TCGA
PFTPSGS
DEG_SCF_FBW7_1
0.2778
p.G857V
TCGA-BF-A1PZ
SKCM
TCGA
PFTPSGS
DEG_SCF_FBW7_1
0.1389
p.G857V
TCGA-D3-A2J8
SKCM
TCGA
PFTPSGS
DEG_SCF_FBW7_1
0.1389
p.G849C
TCGA-CC-A7IH
LIHC
TCGA
PFTPSGS
DEG_SCF_FBW7_1
0.6489
p.G849S
TCGA-CG-4305
STAD
TCGA
PFTPSGS
DEG_SCF_FBW7_1
0.5882
p.T846M
TCGA-CV-7413
HNSC
TCGA
PFTPSGS
DEG_SCF_FBW7_1
0.7423
p.G857E
TCGA-EB-A41A
SKCM
TCGA
PFTPSGS
DEG_SCF_FBW7_1
0.1389
p.P844H
TCGA-EE-A2MQ
SKCM
TCGA
PFTPSGS
DEG_SCF_FBW7_1
0.7694
p.E835K
TCGA-EO-A22U
UCEC
TCGA
PFTPSGS
DEG_SCF_FBW7_1
0.0833
p.E835K
TCGA-W3-AA1Q
SKCM
TCGA
PFTPSGS
DEG_SCF_FBW7_1
0.0833
p.E835D
TCGA-HE-7130
KIRP
TCGA
PFTPSGS
DEG_SCF_FBW7_1
0.0833
p.T838M
SIDM00980
Gastric Carcinoma
GDSC
PFTPSGS
DEG_SCF_FBW7_1
0.1667
p.T838M
ACH-000948
Gastric Cancer
CCLE
PFTPSGS
DEG_SCF_FBW7_1
0.1667
p.T838M
ACH-001807
Liposarcoma
CCLE
PFTPSGS
DEG_SCF_FBW7_1
0.1667
p.T838M
23132-87
stomach
COSMIC
PFTPSGS
DEG_SCF_FBW7_1
0.1667
p.P840S
SNU-1040
large_intestine
COSMIC
PFTPSGS
DEG_SCF_FBW7_1
0.2222
p.T844S
LU-139
lung
COSMIC
PFTPSGS
DEG_SCF_FBW7_1
0.7116
Drug responses associated with KCNQ3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PFTPSGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43525
Potassium voltage-gated channel subfamily KQT member 3
DEG_SCF_FBW7_1
844:850
PFTPSGS
FBXW7
0.9044
More...