DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PGATPGLT
Uniprot ID:
P01130
Source protein:
Low-density lipoprotein receptor
Source gene:
LDLR
Class:
DEG_SCF_FBW7_1
Location:
753:760
E3 ligase:
FBXW7
DEGRON score:
0.9779
ASA_SCORE:
46.5625
COIL:
0.8535
CONS_SCORE:
0.56
DSS_SCORE:
0.5732
HELIX:
0.0433
FCONS_SCORE:
1.0723
RIG_SCORE:
0.6809
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R744Q
TCGA-AX-A2HC
UCEC
TCGA
PGATPGLT
DEG_SCF_FBW7_1
0.0833
p.S768F
TCGA-EB-A44O
SKCM
TCGA
PGATPGLT
DEG_SCF_FBW7_1
0.1111
p.T761R
SIDM00382
Glioblastoma
GDSC
PGATPGLT
DEG_SCF_FBW7_1
0.3056
p.T761R
ACH-000609
Brain Cancer
CCLE
PGATPGLT
DEG_SCF_FBW7_1
0.3056
p.T761R
SF126
central_nervous_system
COSMIC
PGATPGLT
DEG_SCF_FBW7_1
0.3056
p.G764R
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
PGATPGLT
DEG_SCF_FBW7_1
0.2222
Drug responses associated with LDLR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGATPGLT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P01130
Low-density lipoprotein receptor
DEG_SCF_FBW7_1
753:760
PGATPGLT
FBXW7
0.9779
More...