DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PGETPTLE
Uniprot ID:
O15018
Source protein:
PDZ domain-containing protein 2
Source gene:
PDZD2
Class:
DEG_SCF_FBW7_2
Location:
197:204
E3 ligase:
FBXW7
DEGRON score:
0.9969
ASA_SCORE:
80.9125
COIL:
0.8525
CONS_SCORE:
0.3959
DSS_SCORE:
0.6771
HELIX:
0.0639
FCONS_SCORE:
1.1567
RIG_SCORE:
0.643
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A210V
TCGA-AG-A002
READ
TCGA
PGETPTLE
DEG_SCF_FBW7_2
0.1667
p.A210V
TCGA-BB-7870
HNSC
TCGA
PGETPTLE
DEG_SCF_FBW7_2
0.1667
p.A210V
TCGA-HU-A4H8
STAD
TCGA
PGETPTLE
DEG_SCF_FBW7_2
0.1667
p.A210V
DO14378
HNSC
ICGC
PGETPTLE
DEG_SCF_FBW7_2
0.1667
p.A210V
DO47869
STAD
ICGC
PGETPTLE
DEG_SCF_FBW7_2
0.1667
p.A210V
SIDM01030
Esophageal Squamous Cell Carcinoma
GDSC
PGETPTLE
DEG_SCF_FBW7_2
0.1667
p.A210V
ACH-000693
Esophageal Cancer
CCLE
PGETPTLE
DEG_SCF_FBW7_2
0.1667
p.A210V
KYSE-180
oesophagus
COSMIC
PGETPTLE
DEG_SCF_FBW7_2
0.1667
p.G213R
TCGA-D3-A8GQ
SKCM
TCGA
PGETPTLE
DEG_SCF_FBW7_2
0.0833
p.G213R
DO51246
SKCM
ICGC
PGETPTLE
DEG_SCF_FBW7_2
0.0833
p.R208Q
TCGA-LN-A9FP
ESCA
TCGA
PGETPTLE
DEG_SCF_FBW7_2
0.2222
p.R208Q
SIDM00545
Melanoma
GDSC
PGETPTLE
DEG_SCF_FBW7_2
0.2222
p.T209A
DO227614
COCA
ICGC
PGETPTLE
DEG_SCF_FBW7_2
0.6389
p.G189V
DO229006
LICA
ICGC
PGETPTLE
DEG_SCF_FBW7_2
0.1111
p.Y187C
SIDM00722
Mesothelioma
GDSC
PGETPTLE
DEG_SCF_FBW7_2
0.0556
p.S191C
SIDM01611
Endometrial Carcinoma
GDSC
PGETPTLE
DEG_SCF_FBW7_2
0.1667
p.S191C
ACH-000996
Endometrial/Uterine Cancer
CCLE
PGETPTLE
DEG_SCF_FBW7_2
0.1667
p.T202N
SIDM01611
Endometrial Carcinoma
GDSC
PGETPTLE
DEG_SCF_FBW7_2
0.5944
p.T202N
ACH-000996
Endometrial/Uterine Cancer
CCLE
PGETPTLE
DEG_SCF_FBW7_2
0.5944
Drug responses associated with PDZD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGETPTLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15018
PDZ domain-containing protein 2
DEG_SCF_FBW7_2
197:204
PGETPTLE
FBXW7
0.9969
More...