DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PGHTPGNS
Uniprot ID:
Q14563
Source protein:
Semaphorin-3A
Source gene:
SEMA3A
Class:
DEG_SCF_FBW7_1
Location:
737:744
E3 ligase:
FBXW7
DEGRON score:
0.6382
ASA_SCORE:
89.275
COIL:
0.9126
CONS_SCORE:
0.368
DSS_SCORE:
0.7911
HELIX:
0.0659
FCONS_SCORE:
0.8355
RIG_SCORE:
0.5349
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N743K
TCGA-05-5428
LUAD
TCGA
PGHTPGNS
DEG_SCF_FBW7_1
0.5806
p.N743K
DO24005
LUAD
ICGC
PGHTPGNS
DEG_SCF_FBW7_1
0.5806
p.D729N
TCGA-24-1927
OV
TCGA
PGHTPGNS
DEG_SCF_FBW7_1
0.1111
p.D729N
DO31604
OV
ICGC
PGHTPGNS
DEG_SCF_FBW7_1
0.1111
p.D729Y
TCGA-49-6743
LUAD
TCGA
PGHTPGNS
DEG_SCF_FBW7_1
0.1111
p.D729Y
DO26092
LUAD
ICGC
PGHTPGNS
DEG_SCF_FBW7_1
0.1111
p.R734L
TCGA-49-AAR4
LUAD
TCGA
PGHTPGNS
DEG_SCF_FBW7_1
0.25
p.R734L
TCGA-MN-A4N1
LUAD
TCGA
PGHTPGNS
DEG_SCF_FBW7_1
0.25
p.R734L
DO218920
LUAD
ICGC
PGHTPGNS
DEG_SCF_FBW7_1
0.25
p.R734L
DO45328
LUAD
ICGC
PGHTPGNS
DEG_SCF_FBW7_1
0.25
p.R728S
TCGA-49-AAR4
LUAD
TCGA
PGHTPGNS
DEG_SCF_FBW7_1
0.0833
p.R728S
DO218920
LUAD
ICGC
PGHTPGNS
DEG_SCF_FBW7_1
0.0833
p.W747C
TCGA-56-7221
LUSC
TCGA
PGHTPGNS
DEG_SCF_FBW7_1
0.25
p.W747C
DO26689
LUSC
ICGC
PGHTPGNS
DEG_SCF_FBW7_1
0.25
p.W747L
TCGA-56-7221
LUSC
TCGA
PGHTPGNS
DEG_SCF_FBW7_1
0.25
p.W747L
DO26689
LUSC
ICGC
PGHTPGNS
DEG_SCF_FBW7_1
0.25
p.R736M
TCGA-AX-A060
UCEC
TCGA
PGHTPGNS
DEG_SCF_FBW7_1
0.3056
p.R736M
DO228928
LICA
ICGC
PGHTPGNS
DEG_SCF_FBW7_1
0.3056
p.R736M
DO42576
UCEC
ICGC
PGHTPGNS
DEG_SCF_FBW7_1
0.3056
p.K748N
TCGA-BR-4184
STAD
TCGA
PGHTPGNS
DEG_SCF_FBW7_1
0.3333
p.K748N
DO38328
STAD
ICGC
PGHTPGNS
DEG_SCF_FBW7_1
0.3333
p.R733C
TCGA-CA-6717
COAD
TCGA
PGHTPGNS
DEG_SCF_FBW7_1
0.2222
p.R733C
DO8264
COAD
ICGC
PGHTPGNS
DEG_SCF_FBW7_1
0.2222
p.R733C
SIDM00673
Breast Carcinoma
GDSC
PGHTPGNS
DEG_SCF_FBW7_1
0.2222
p.R733C
HCC70
breast
COSMIC
PGHTPGNS
DEG_SCF_FBW7_1
0.2222
p.R733L
TCGA-DD-A1EE
LIHC
TCGA
PGHTPGNS
DEG_SCF_FBW7_1
0.2222
p.R733L
TCGA-G3-A25S
LIHC
TCGA
PGHTPGNS
DEG_SCF_FBW7_1
0.2222
p.R733L
DO23018
LIHC
ICGC
PGHTPGNS
DEG_SCF_FBW7_1
0.2222
p.R733L
DO22857
LIHC
ICGC
PGHTPGNS
DEG_SCF_FBW7_1
0.2222
p.R730Q
TCGA-GN-A266
SKCM
TCGA
PGHTPGNS
DEG_SCF_FBW7_1
0.1389
p.R730Q
DO37432
SKCM
ICGC
PGHTPGNS
DEG_SCF_FBW7_1
0.1389
p.K754M
DO228313
LICA
ICGC
PGHTPGNS
DEG_SCF_FBW7_1
0.1667
p.T740N
DO229035
LICA
ICGC
PGHTPGNS
DEG_SCF_FBW7_1
0.7055
p.H749R
DO232761
PBCA
ICGC
PGHTPGNS
DEG_SCF_FBW7_1
0.1944
p.R734W
SIDM01611
Endometrial Carcinoma
GDSC
PGHTPGNS
DEG_SCF_FBW7_1
0.25
p.R734W
ACH-000996
Endometrial/Uterine Cancer
CCLE
PGHTPGNS
DEG_SCF_FBW7_1
0.25
Drug responses associated with SEMA3A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGHTPGNS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14563
Semaphorin-3A
DEG_SCF_FBW7_1
737:744
PGHTPGNS
FBXW7
0.6382
More...