DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PGPTPEPS
Uniprot ID:
Q8N6N2
Source protein:
Tetratricopeptide repeat protein 9B
Source gene:
TTC9B
Class:
DEG_SCF_FBW7_1
Location:
44:51
E3 ligase:
FBXW7
DEGRON score:
0.9775
ASA_SCORE:
82.25
COIL:
0.9529
CONS_SCORE:
0.2215
DSS_SCORE:
0.7665
HELIX:
0.0285
FCONS_SCORE:
0.9555
RIG_SCORE:
0.5056
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S60C
TCGA-UB-A7MB
LIHC
TCGA
PGPTPEPS
DEG_SCF_FBW7_1
0.5278
p.S60C
DO52318
LIHC
ICGC
PGPTPEPS
DEG_SCF_FBW7_1
0.5278
p.T47A
DO8360
COAD
ICGC
PGPTPEPS
DEG_SCF_FBW7_1
0.825
p.S60I
DO229259
THCA
ICGC
PGPTPEPS
DEG_SCF_FBW7_1
0.5278
p.S41L
SIDM01307
Colorectal Carcinoma
GDSC
PGPTPEPS
DEG_SCF_FBW7_1
0.25
p.S60G
SIDM00118
Colorectal Carcinoma
GDSC
PGPTPEPS
DEG_SCF_FBW7_1
0.5278
p.S60G
ACH-001081
Colon/Colorectal Cancer
CCLE
PGPTPEPS
DEG_SCF_FBW7_1
0.5278
p.S60G
HCC2998
large_intestine
COSMIC
PGPTPEPS
DEG_SCF_FBW7_1
0.5278
p.G45R
ACH-000861
Lung Cancer
CCLE
PGPTPEPS
DEG_SCF_FBW7_1
0.6457
Drug responses associated with TTC9B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGPTPEPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N6N2
Tetratricopeptide repeat protein 9B
DEG_SCF_FBW7_1
44:51
PGPTPEPS
FBXW7
0.9775
More...