DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PGTPAAT
Uniprot ID:
Q8N944
Source protein:
APC membrane recruitment protein 3
Source gene:
AMER3
Class:
DEG_SCF_FBW7_1
Location:
405:411
E3 ligase:
FBXW7
DEGRON score:
0.9465
ASA_SCORE:
68.6
COIL:
0.9071
CONS_SCORE:
0.7165
DSS_SCORE:
0.6851
HELIX:
0.0403
FCONS_SCORE:
0.785
RIG_SCORE:
0.6276
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A410T
TCGA-06-5413
GBM
TCGA
PGTPAAT
DEG_SCF_FBW7_1
0.6028
p.A410T
DO11711
GBM
ICGC
PGTPAAT
DEG_SCF_FBW7_1
0.6028
p.A410T
DO232761
PBCA
ICGC
PGTPAAT
DEG_SCF_FBW7_1
0.6028
p.D420Y
TCGA-64-1676
LUAD
TCGA
PGTPAAT
DEG_SCF_FBW7_1
0.0833
p.D420Y
DO23629
LUAD
ICGC
PGTPAAT
DEG_SCF_FBW7_1
0.0833
p.T407I
TCGA-95-7043
LUAD
TCGA
PGTPAAT
DEG_SCF_FBW7_1
0.7078
p.T407I
DO24739
LUAD
ICGC
PGTPAAT
DEG_SCF_FBW7_1
0.7078
p.G406S
TCGA-B5-A11E
UCEC
TCGA
PGTPAAT
DEG_SCF_FBW7_1
0.5882
p.G406S
DO41644
UCEC
ICGC
PGTPAAT
DEG_SCF_FBW7_1
0.5882
p.E397D
TCGA-BR-7196
STAD
TCGA
PGTPAAT
DEG_SCF_FBW7_1
0.1111
p.E397D
DO38235
STAD
ICGC
PGTPAAT
DEG_SCF_FBW7_1
0.1111
p.S404G
TCGA-CG-5721
STAD
TCGA
PGTPAAT
DEG_SCF_FBW7_1
0.3056
p.S404G
DO38192
STAD
ICGC
PGTPAAT
DEG_SCF_FBW7_1
0.3056
p.D415N
TCGA-D3-A8GQ
SKCM
TCGA
PGTPAAT
DEG_SCF_FBW7_1
0.2222
p.D415N
DO51246
SKCM
ICGC
PGTPAAT
DEG_SCF_FBW7_1
0.2222
p.S416I
TCGA-DX-A6YV
SARC
TCGA
PGTPAAT
DEG_SCF_FBW7_1
0.1944
p.S416I
DO220011
SARC
ICGC
PGTPAAT
DEG_SCF_FBW7_1
0.1944
p.R414Q
TCGA-E7-A6ME
BLCA
TCGA
PGTPAAT
DEG_SCF_FBW7_1
0.25
p.R414Q
DO51874
BLCA
ICGC
PGTPAAT
DEG_SCF_FBW7_1
0.25
p.P413T
TCGA-EE-A2GT
SKCM
TCGA
PGTPAAT
DEG_SCF_FBW7_1
0.2778
p.P413T
DO37946
SKCM
ICGC
PGTPAAT
DEG_SCF_FBW7_1
0.2778
p.D398N
TCGA-EE-A2MJ
SKCM
TCGA
PGTPAAT
DEG_SCF_FBW7_1
0.1389
p.D398N
DO38099
SKCM
ICGC
PGTPAAT
DEG_SCF_FBW7_1
0.1389
p.K399N
TCGA-EK-A3GJ
CESC
TCGA
PGTPAAT
DEG_SCF_FBW7_1
0.2778
p.K399N
DO49962
CESC
ICGC
PGTPAAT
DEG_SCF_FBW7_1
0.2778
p.P405S
TCGA-G9-6384
PRAD
TCGA
PGTPAAT
DEG_SCF_FBW7_1
0.6752
p.P405S
DO36316
PRAD
ICGC
PGTPAAT
DEG_SCF_FBW7_1
0.6752
p.P413Q
TCGA-L4-A4E5
LUAD
TCGA
PGTPAAT
DEG_SCF_FBW7_1
0.2778
p.P413Q
DO24320
LUAD
ICGC
PGTPAAT
DEG_SCF_FBW7_1
0.2778
p.E401D
DO50339
ESAD
ICGC
PGTPAAT
DEG_SCF_FBW7_1
0.2222
p.G406D
DO48211
ESCA
ICGC
PGTPAAT
DEG_SCF_FBW7_1
0.6087
p.A410S
DO229029
LICA
ICGC
PGTPAAT
DEG_SCF_FBW7_1
0.6477
p.G406V
SIDM02041
Colorectal Carcinoma
GDSC
PGTPAAT
DEG_SCF_FBW7_1
0.6421
p.L395F
SIDM01116
Non-Small Cell Lung Carcinoma
GDSC
PGTPAAT
DEG_SCF_FBW7_1
0.0556
p.P408S
SIDM00007
Other Solid Cancers
GDSC
PGTPAAT
DEG_SCF_FBW7_1
0.6752
p.P408S
ACH-001550
Skin Cancer
CCLE
PGTPAAT
DEG_SCF_FBW7_1
0.6752
p.P408S
MCC13
skin
COSMIC
PGTPAAT
DEG_SCF_FBW7_1
0.6752
p.A421T
SIDM00217
Colorectal Carcinoma
GDSC
PGTPAAT
DEG_SCF_FBW7_1
0.0556
p.A421T
ACH-000999
Colon/Colorectal Cancer
CCLE
PGTPAAT
DEG_SCF_FBW7_1
0.0556
p.A421T
SNU-1040
large_intestine
COSMIC
PGTPAAT
DEG_SCF_FBW7_1
0.0556
Drug responses associated with AMER3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGTPAAT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N944
APC membrane recruitment protein 3
DEG_SCF_FBW7_1
405:411
PGTPAAT
FBXW7
0.9465
More...