DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PGTPAPT
Uniprot ID:
Q6WN34
Source protein:
Chordin-like protein 2
Source gene:
CHRDL2
Class:
DEG_SCF_FBW7_1
Location:
211:217
E3 ligase:
FBXW7
DEGRON score:
0.8325
ASA_SCORE:
68.9143
COIL:
0.8074
CONS_SCORE:
0.3984
DSS_SCORE:
0.6759
HELIX:
0.026
FCONS_SCORE:
0.9543
RIG_SCORE:
0.5633
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S224N
TCGA-CA-6718
COAD
TCGA
PGTPAPT
DEG_SCF_FBW7_1
0.1389
p.S224N
DO7801
COAD
ICGC
PGTPAPT
DEG_SCF_FBW7_1
0.1389
p.P211L
TCGA-DG-A2KJ
CESC
TCGA
PGTPAPT
DEG_SCF_FBW7_1
0.6471
p.P211L
TCGA-XK-AAIW
PRAD
TCGA
PGTPAPT
DEG_SCF_FBW7_1
0.6471
p.P211L
DO51594
CESC
ICGC
PGTPAPT
DEG_SCF_FBW7_1
0.6471
p.P211L
DO8858
COAD
ICGC
PGTPAPT
DEG_SCF_FBW7_1
0.6471
p.P211L
DO51407
PRAD
ICGC
PGTPAPT
DEG_SCF_FBW7_1
0.6471
p.P211L
SIDM01729
Endometrial Carcinoma
GDSC
PGTPAPT
DEG_SCF_FBW7_1
0.6471
p.P211L
ACH-000909
Endometrial/Uterine Cancer
CCLE
PGTPAPT
DEG_SCF_FBW7_1
0.6471
p.K208N
TCGA-DK-A3WX
BLCA
TCGA
PGTPAPT
DEG_SCF_FBW7_1
0.3611
p.K208N
DO696
BLCA
ICGC
PGTPAPT
DEG_SCF_FBW7_1
0.3611
p.S203N
TCGA-DU-6407
LGG
TCGA
PGTPAPT
DEG_SCF_FBW7_1
0.1111
p.S203N
DO22295
LGG
ICGC
PGTPAPT
DEG_SCF_FBW7_1
0.1111
p.G206E
TCGA-IH-A3EA
SKCM
TCGA
PGTPAPT
DEG_SCF_FBW7_1
0.1944
p.G206E
DO37667
SKCM
ICGC
PGTPAPT
DEG_SCF_FBW7_1
0.1944
p.A221T
TCGA-L5-A43J
ESCA
TCGA
PGTPAPT
DEG_SCF_FBW7_1
0.2222
p.A221T
DO227646
COCA
ICGC
PGTPAPT
DEG_SCF_FBW7_1
0.2222
p.A221T
ACH-001991
Primary
CCLE
PGTPAPT
DEG_SCF_FBW7_1
0.2222
p.S203G
TCGA-VQ-A8PX
STAD
TCGA
PGTPAPT
DEG_SCF_FBW7_1
0.1111
p.S203G
DO51778
STAD
ICGC
PGTPAPT
DEG_SCF_FBW7_1
0.1111
p.R209I
DO233156
GACA
ICGC
PGTPAPT
DEG_SCF_FBW7_1
0.2778
p.S220R
DO228952
LICA
ICGC
PGTPAPT
DEG_SCF_FBW7_1
0.25
p.A215V
DO222708
MELA
ICGC
PGTPAPT
DEG_SCF_FBW7_1
0.5825
p.I226T
SIDM00545
Melanoma
GDSC
PGTPAPT
DEG_SCF_FBW7_1
0.0833
p.I226T
ACH-000987
Skin Cancer
CCLE
PGTPAPT
DEG_SCF_FBW7_1
0.0833
p.I226T
Mewo
skin
COSMIC
PGTPAPT
DEG_SCF_FBW7_1
0.0833
p.I226V
SIDM00773
Non-Cancerous
GDSC
PGTPAPT
DEG_SCF_FBW7_1
0.0833
p.I226V
SIDM01090
Colorectal Carcinoma
GDSC
PGTPAPT
DEG_SCF_FBW7_1
0.0833
p.I226V
SIDM00210
Ovarian Carcinoma
GDSC
PGTPAPT
DEG_SCF_FBW7_1
0.0833
p.I226V
SIDM00529
Breast Carcinoma
GDSC
PGTPAPT
DEG_SCF_FBW7_1
0.0833
p.I226V
SIDM00971
Breast Carcinoma
GDSC
PGTPAPT
DEG_SCF_FBW7_1
0.0833
p.I226V
SIDM00493
Other Solid Cancers
GDSC
PGTPAPT
DEG_SCF_FBW7_1
0.0833
p.I226V
SIDM00875
Breast Carcinoma
GDSC
PGTPAPT
DEG_SCF_FBW7_1
0.0833
p.I226V
SIDM00309
Mesothelioma
GDSC
PGTPAPT
DEG_SCF_FBW7_1
0.0833
p.I226V
SIDM00956
Esophageal Squamous Cell Carcinoma
GDSC
PGTPAPT
DEG_SCF_FBW7_1
0.0833
p.I226V
SIDM00774
Breast Carcinoma
GDSC
PGTPAPT
DEG_SCF_FBW7_1
0.0833
p.I226V
SIDM00257
Neuroblastoma
GDSC
PGTPAPT
DEG_SCF_FBW7_1
0.0833
p.I226V
SIDM00760
Small Cell Lung Carcinoma
GDSC
PGTPAPT
DEG_SCF_FBW7_1
0.0833
p.S220N
SIDM00487
Colorectal Carcinoma
GDSC
PGTPAPT
DEG_SCF_FBW7_1
0.25
p.S220N
ACH-000963
Colon/Colorectal Cancer
CCLE
PGTPAPT
DEG_SCF_FBW7_1
0.25
p.S220N
CCK-81
large_intestine
COSMIC
PGTPAPT
DEG_SCF_FBW7_1
0.25
p.R207I
SIDM01662
Plasma Cell Myeloma
GDSC
PGTPAPT
DEG_SCF_FBW7_1
0.2222
p.R207I
ACH-000564
Myeloma
CCLE
PGTPAPT
DEG_SCF_FBW7_1
0.2222
p.S213G
22RV1
prostate
COSMIC
PGTPAPT
DEG_SCF_FBW7_1
0.6993
p.G212S
NCCIT
testis
COSMIC
PGTPAPT
DEG_SCF_FBW7_1
0.5882
Drug responses associated with CHRDL2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGTPAPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6WN34
Chordin-like protein 2
DEG_SCF_FBW7_1
211:217
PGTPAPT
FBXW7
0.8325
More...