DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PGTPGGS
Uniprot ID:
Q9Y2J0
Source protein:
Rabphilin-3A
Source gene:
RPH3A
Class:
DEG_SCF_FBW7_1
Location:
294:300
E3 ligase:
FBXW7
DEGRON score:
0.9707
ASA_SCORE:
58.1
COIL:
0.9186
CONS_SCORE:
0.3373
DSS_SCORE:
0.9471
HELIX:
0.0271
FCONS_SCORE:
0.7776
RIG_SCORE:
0.3955
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G305R
TCGA-05-4417
LUAD
TCGA
PGTPGGS
DEG_SCF_FBW7_1
0.1944
p.G305R
DO23570
LUAD
ICGC
PGTPGGS
DEG_SCF_FBW7_1
0.1944
p.P302L
TCGA-28-1753
GBM
TCGA
PGTPGGS
DEG_SCF_FBW7_1
0.2778
p.P302L
DO11687
GBM
ICGC
PGTPGGS
DEG_SCF_FBW7_1
0.2778
p.P306T
TCGA-37-3792
LUSC
TCGA
PGTPGGS
DEG_SCF_FBW7_1
0.1667
p.P306T
DO27192
LUSC
ICGC
PGTPGGS
DEG_SCF_FBW7_1
0.1667
p.P288L
TCGA-4A-A93W
KIRP
TCGA
PGTPGGS
DEG_SCF_FBW7_1
0.1667
p.P288L
DO219688
KIRP
ICGC
PGTPGGS
DEG_SCF_FBW7_1
0.1667
p.S285N
DO222755
COCA
ICGC
PGTPGGS
DEG_SCF_FBW7_1
0.0833
p.Q293H
DO229016
COCA
ICGC
PGTPGGS
DEG_SCF_FBW7_1
0.3056
p.Q293H
DO229003
COCA
ICGC
PGTPGGS
DEG_SCF_FBW7_1
0.3056
p.Q293H
DO231075
LUSC
ICGC
PGTPGGS
DEG_SCF_FBW7_1
0.3056
p.G295W
DO229029
LICA
ICGC
PGTPGGS
DEG_SCF_FBW7_1
0.6714
p.G298E
DO220886
MELA
ICGC
PGTPGGS
DEG_SCF_FBW7_1
0.6087
p.P304L
SIDM01460
Glioma
GDSC
PGTPGGS
DEG_SCF_FBW7_1
0.2222
p.P304L
ACH-000592
Brain Cancer
CCLE
PGTPGGS
DEG_SCF_FBW7_1
0.2222
p.Q293K
ACH-000029
Lung Cancer
CCLE
PGTPGGS
DEG_SCF_FBW7_1
0.3056
p.G288W
22RV1
prostate
COSMIC
PGTPGGS
DEG_SCF_FBW7_1
0.1667
p.R299Q
HT-115
large_intestine
COSMIC
PGTPGGS
DEG_SCF_FBW7_1
0.7329
p.Y290H
SNU-1040
large_intestine
COSMIC
PGTPGGS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with RPH3A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGTPGGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y2J0
Rabphilin-3A
DEG_SCF_FBW7_1
294:300
PGTPGGS
FBXW7
0.9707
More...