DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PGTPGTT
Uniprot ID:
Q07092
Source protein:
Collagen alpha-1
Source gene:
COL16A1
Class:
DEG_SCF_FBW7_1
Location:
693:699
E3 ligase:
FBXW7
DEGRON score:
0.9987
ASA_SCORE:
69.8
COIL:
0.9434
CONS_SCORE:
0.6543
DSS_SCORE:
0.8645
HELIX:
0.007
FCONS_SCORE:
1.1739
RIG_SCORE:
0.513
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R701Q
TCGA-AP-A0LM
UCEC
TCGA
PGTPGTT
DEG_SCF_FBW7_1
0.2778
p.A687S
TCGA-D1-A0ZZ
UCEC
TCGA
PGTPGTT
DEG_SCF_FBW7_1
0.1667
p.P693S
TCGA-FR-A8YC
SKCM
TCGA
PGTPGTT
DEG_SCF_FBW7_1
0.6752
p.R701W
TCGA-G9-6494
PRAD
TCGA
PGTPGTT
DEG_SCF_FBW7_1
0.2778
p.S704L
DO1129
BRCA
ICGC
PGTPGTT
DEG_SCF_FBW7_1
0.1944
p.P689T
DO229029
LICA
ICGC
PGTPGTT
DEG_SCF_FBW7_1
0.2222
p.D691E
DO231813
LINC
ICGC
PGTPGTT
DEG_SCF_FBW7_1
0.2778
p.T694M
DO36221
PRAD
ICGC
PGTPGTT
DEG_SCF_FBW7_1
0.7423
p.R700W
DO36315
PRAD
ICGC
PGTPGTT
DEG_SCF_FBW7_1
0.3056
p.P692S
DO50301
SKCM
ICGC
PGTPGTT
DEG_SCF_FBW7_1
0.3056
p.G708E
DO229229
THCA
ICGC
PGTPGTT
DEG_SCF_FBW7_1
0.0833
p.R700Q
DO43306
UCEC
ICGC
PGTPGTT
DEG_SCF_FBW7_1
0.3056
p.A686S
DO43122
UCEC
ICGC
PGTPGTT
DEG_SCF_FBW7_1
0.1389
p.G688W
ACH-000816
Lung Cancer
CCLE
PGTPGTT
DEG_SCF_FBW7_1
0.1944
p.N689Y
ACH-001853
Bile Duct Cancer
CCLE
PGTPGTT
DEG_SCF_FBW7_1
0.2222
Drug responses associated with COL16A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGTPGTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q07092
Collagen alpha-1
DEG_SCF_FBW7_1
693:699
PGTPGTT
FBXW7
0.9987
More...