DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PGTPPST
Uniprot ID:
Q99728
Source protein:
BRCA1-associated RING domain protein 1
Source gene:
BARD1
Class:
DEG_SCF_FBW7_1
Location:
392:398
E3 ligase:
FBXW7
DEGRON score:
0.9984
ASA_SCORE:
78.0857
COIL:
0.9247
CONS_SCORE:
0.4074
DSS_SCORE:
0.5545
HELIX:
0.0546
FCONS_SCORE:
1.1717
RIG_SCORE:
0.5721
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R406Q
TCGA-AP-A0LM
UCEC
TCGA
PGTPPST
DEG_SCF_FBW7_1
0.1111
p.R406Q
DO43306
UCEC
ICGC
PGTPPST
DEG_SCF_FBW7_1
0.1111
p.G393S
TCGA-AX-A2HD
UCEC
TCGA
PGTPPST
DEG_SCF_FBW7_1
0.5882
p.G393S
DO42608
UCEC
ICGC
PGTPPST
DEG_SCF_FBW7_1
0.5882
p.I388V
TCGA-CV-7437
HNSC
TCGA
PGTPPST
DEG_SCF_FBW7_1
0.2222
p.I388V
DO14902
HNSC
ICGC
PGTPPST
DEG_SCF_FBW7_1
0.2222
p.T394A
TCGA-FB-AAQ6
PAAD
TCGA
PGTPPST
DEG_SCF_FBW7_1
0.825
p.T394A
DO218971
PAAD
ICGC
PGTPPST
DEG_SCF_FBW7_1
0.825
p.V407M
DO222946
BTCA
ICGC
PGTPPST
DEG_SCF_FBW7_1
0.0833
p.S397F
DO233169
GACA
ICGC
PGTPPST
DEG_SCF_FBW7_1
0.6871
p.R405M
SIDM00241
Breast Carcinoma
GDSC
PGTPPST
DEG_SCF_FBW7_1
0.1389
p.R405M
ACH-002179
Breast Cancer
CCLE
PGTPPST
DEG_SCF_FBW7_1
0.1389
p.R405M
OCUB-M
breast
COSMIC
PGTPPST
DEG_SCF_FBW7_1
0.1389
p.R386M
OCUB-M
breast
COSMIC
PGTPPST
DEG_SCF_FBW7_1
0.1667
Drug responses associated with BARD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGTPPST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q99728
BRCA1-associated RING domain protein 1
DEG_SCF_FBW7_1
392:398
PGTPPST
FBXW7
0.9984
More...