DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PGTPSKT
Uniprot ID:
Q6MZP7
Source protein:
Protein lin-54 homolog
Source gene:
LIN54
Class:
DEG_SCF_FBW7_1
Location:
278:284
E3 ligase:
FBXW7
DEGRON score:
0.982
ASA_SCORE:
83.2571
COIL:
0.8404
CONS_SCORE:
0.319
DSS_SCORE:
0.5187
HELIX:
0.0183
FCONS_SCORE:
1.0554
RIG_SCORE:
0.655
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S290G
TCGA-DD-AADG
LIHC
TCGA
PGTPSKT
DEG_SCF_FBW7_1
0.1667
p.I287M
TCGA-EW-A1IZ
BRCA
TCGA
PGTPSKT
DEG_SCF_FBW7_1
0.25
p.G279R
TCGA-F1-6177
STAD
TCGA
PGTPSKT
DEG_SCF_FBW7_1
0.6457
p.K283N
TCGA-ZF-A9RF
BLCA
TCGA
PGTPSKT
DEG_SCF_FBW7_1
0.5806
p.S288R
DO231939
LICA
ICGC
PGTPSKT
DEG_SCF_FBW7_1
0.2222
p.P291S
DO41331
UCEC
ICGC
PGTPSKT
DEG_SCF_FBW7_1
0.1389
p.T280S
SIDM01570
Ovarian Carcinoma
GDSC
PGTPSKT
DEG_SCF_FBW7_1
0.8227
p.T280S
ACH-000324
Ovarian Cancer
CCLE
PGTPSKT
DEG_SCF_FBW7_1
0.8227
p.R285Q
CRO-AP3
NS
COSMIC
PGTPSKT
DEG_SCF_FBW7_1
0.3056
Drug responses associated with LIN54 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGTPSKT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6MZP7
Protein lin-54 homolog
DEG_SCF_FBW7_1
278:284
PGTPSKT
FBXW7
0.982
More...