DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PGTPSSE
Uniprot ID:
O15027
Source protein:
Protein transport protein Sec16A
Source gene:
SEC16A
Class:
DEG_SCF_FBW7_2
Location:
1905:1911
E3 ligase:
FBXW7
DEGRON score:
0.932
ASA_SCORE:
75.7143
COIL:
0.8761
CONS_SCORE:
0.2647
DSS_SCORE:
0.7409
HELIX:
0.076
FCONS_SCORE:
0.9302
RIG_SCORE:
0.614
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K1911E
ACH-000904
Lung Cancer
CCLE
PGTPSSE
DEG_SCF_FBW7_2
0.7022
p.K1911E
ACH-001362
Lung Cancer
CCLE
PGTPSSE
DEG_SCF_FBW7_2
0.7022
p.K1911E
NCI-H1770
lung
COSMIC
PGTPSSE
DEG_SCF_FBW7_2
0.7022
p.P1905S
TCGA-AA-3977
COAD
TCGA
PGTPSSE
DEG_SCF_FBW7_2
0.6752
p.P1905S
DO8730
COAD
ICGC
PGTPSSE
DEG_SCF_FBW7_2
0.6752
p.P1905L
DO219871
SKCA
ICGC
PGTPSSE
DEG_SCF_FBW7_2
0.6471
p.G1906D
TCGA-B5-A3FC
UCEC
TCGA
PGTPSSE
DEG_SCF_FBW7_2
0.6087
p.G1906D
DO41871
UCEC
ICGC
PGTPSSE
DEG_SCF_FBW7_2
0.6087
p.Q1903K
DO229037
LICA
ICGC
PGTPSSE
DEG_SCF_FBW7_2
0.2778
p.S1903F
ACH-000987
Skin Cancer
CCLE
PGTPSSE
DEG_SCF_FBW7_2
0.2778
p.S1903F
Mewo
skin
COSMIC
PGTPSSE
DEG_SCF_FBW7_2
0.2778
p.P1901S
TCGA-A6-6654
COAD
TCGA
PGTPSSE
DEG_SCF_FBW7_2
0.2222
p.P1901S
DO9498
COAD
ICGC
PGTPSSE
DEG_SCF_FBW7_2
0.2222
p.P1901L
SIDM00052
Esophageal Squamous Cell Carcinoma
GDSC
PGTPSSE
DEG_SCF_FBW7_2
0.2222
p.P1901L
SIDM00703
Non-Small Cell Lung Carcinoma
GDSC
PGTPSSE
DEG_SCF_FBW7_2
0.2222
p.P1901L
SIDM00971
Breast Carcinoma
GDSC
PGTPSSE
DEG_SCF_FBW7_2
0.2222
p.P1901L
SIDM00048
Non-Small Cell Lung Carcinoma
GDSC
PGTPSSE
DEG_SCF_FBW7_2
0.2222
p.P1901L
SIDM00875
Breast Carcinoma
GDSC
PGTPSSE
DEG_SCF_FBW7_2
0.2222
p.P1901L
SIDM00808
Burkitt's Lymphoma
GDSC
PGTPSSE
DEG_SCF_FBW7_2
0.2222
p.P1901L
SIDM01254
Burkitt's Lymphoma
GDSC
PGTPSSE
DEG_SCF_FBW7_2
0.2222
p.P1900L
ACH-000380
Myeloma
CCLE
PGTPSSE
DEG_SCF_FBW7_2
0.1944
p.P1900L
KMS-12-BM
haematopoietic_and_lymphoid_tissue
COSMIC
PGTPSSE
DEG_SCF_FBW7_2
0.1944
p.L1900P
MFE-319
endometrium
COSMIC
PGTPSSE
DEG_SCF_FBW7_2
0.1944
p.R1917W
DO229250
THCA
ICGC
PGTPSSE
DEG_SCF_FBW7_2
0.1667
p.T1898R
ACH-001065
Breast Cancer
CCLE
PGTPSSE
DEG_SCF_FBW7_2
0.1389
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Drug responses associated with SEC16A mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of PGTPSSE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15027
Protein transport protein Sec16A
DEG_SCF_FBW7_2
1905:1911
PGTPSSE
FBXW7
0.932
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